DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and Agpat2

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001101291.1 Gene:Agpat2 / 311821 RGDID:1309229 Length:278 Species:Rattus norvegicus


Alignment Length:272 Identity:101/272 - (37%)
Similarity:156/272 - (57%) Gaps:10/272 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LLMLPFLYETNHIFRYYFKFLMYYGI-VSFNSIILIPAFLT---RPCDVRNLLWASTWCHRVSTL 76
            ||:|..|.:.|...|:|.|..:|..: :||::...|...|.   |..|  |:...|.:......:
  Rat    11 LLLLLLLVQLNRTARFYVKVGLYCVLCLSFSAAASIVCLLRHGGRTVD--NMSIISWFVRSFKYV 73

  Fly    77 IGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPFGLAAWLA 141
            .|||:|:.|::.|..|..|:|::||||.||::|:..|  :..:|..:|||||.:..|.||..:|.
  Rat    74 YGLRFEVSGQKKLEVDGPCVIISNHQSILDMMGLMEI--LPKRCVQIAKRELMFTGPVGLIMYLG 136

  Fly   142 GLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIPILP 206
            |:.||:|.:.:.|...:.|:...:.|:.:|:|::|||||.:.|.|.|||||||::||..|:||:|
  Rat   137 GVYFINRQQAKTAMSLMADLGDLMVKENLKVWIYPEGTRNDNGDLLPFKKGAFYLAIQAQVPIIP 201

  Fly   207 VVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFKVTSAEALHR 271
            ||:||:.:|.|.|.|:..||.|.:..|..|.|.|||..|:..|::.....|..|| :..:|....
  Rat   202 VVYSSFSSFYNVKTKLFTSGTIRVQVLDAVPTNGLTDADVTKLVDTCYQSMRATF-LQISEIPQE 265

  Fly   272 YKPIKKVGI-PA 282
            ...||:.|: ||
  Rat   266 NSTIKESGVLPA 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 75/183 (41%)
Agpat2NP_001101291.1 LPLAT_AGPAT-like 67..240 CDD:153251 73/174 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166335581
Domainoid 1 1.000 136 1.000 Domainoid score I4802
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1623097at2759
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - otm46392
orthoMCL 1 0.900 - - OOG6_100535
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X864
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.610

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