DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Agpat1 and Agpat5

DIOPT Version :9

Sequence 1:	NP_001259494.1	Gene:	Agpat1 / 32230	FlyBaseID:	FBgn0030421	Length:	343	Species:	Drosophila melanogaster
Sequence 2:	XP_017455638.1	Gene:	Agpat5 / 306582	RGDID:	1306405	Length:	365	Species:	Rattus norvegicus

Alignment Length:	236	Identity:	58/236 - (24%)
Similarity:	88/236 - (37%)	Gaps:	85/236 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    84 RGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRE-----LFYAWPFGLAAWLA-- 141
            :.||::      |.:|||||::|       |.|.:   ::|.|:     :.|....|| .||.
  Rat    82 KNKENV------IYLANHQSTVD-------WIVAD---MLAARQDALGHVRYVLKDGL-KWLPLY 129

  Fly   142 -------GLIFIDRVRGEKARETLNDVNRRIKKQR-------IKLWVFPEGTRRNT------GAL 186
                   |.|::      |.....||...|.|.|.       :.|.:||||||.|.      .|.
  Rat   130 GFYFAQHGGIYV------KRSAKFNDKEMRSKLQSYVNAGTPMYLVIFPEGTRYNATYTKLLSAS 188

  Fly   187 HPF--KKG-------------AFHMAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPV 236
            ..|  ::|             |.|:|.|.....|..::.....:..::|   |||:.   :.||.
  Rat   189 QAFAAQRGLAVLKHVLTPRIKATHVAFDSMKSHLDAIYDVTVVYEGNEK---NSGKY---SNPPS 247

  Fly   237 STEGLTK---------DDID-----VLMERVRSQMIETFKV 263
            .||.|.|         |.||     ...|.::..:.|.|::
  Rat   248 MTEFLCKQCPRLHIHFDRIDRKEVPEEQEHMKKWLHERFEI 288

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Agpat1	NP_001259494.1	LPLAT_AGPAT-like	70..254	CDD:153251	56/225 (25%)
Agpat5	XP_017455638.1	LPLAT_LCLAT1-like	63..264	CDD:153252	52/210 (25%)
Agpat5	XP_017455638.1	Acyltransf_C	251..320	CDD:406475	8/38 (21%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0204
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810