DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and slc1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_594605.1 Gene:slc1 / 2542560 PomBaseID:SPAC1851.02 Length:279 Species:Schizosaccharomyces pombe


Alignment Length:263 Identity:81/263 - (30%)
Similarity:137/263 - (52%) Gaps:14/263 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MITMTSFIELLGLFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSII-LIPAFLTRPCD---VR 61
            :.|:|.|:.|.|:.....||      ...||:|::...:..::.:|.. :|.:.:.|.|.   :.
pombe     9 LATVTVFVGLCGINRFFTLP------KCIRYHFRYFACHTFLAISSAYGVIASVVARLCGYPVMG 67

  Fly    62 NLLWASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKR 126
            ..|.|..:....||::..|:::..:|.|.|.::.::|.||||.||:|.:...:.  ...:|:||:
pombe    68 QYLTAKAYYGLASTILDFRFKIENEEILRKHKSAVLVVNHQSELDILAIGRTFG--PNYSVIAKK 130

  Fly   127 ELFYAWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNT--GALHPF 189
            .|.|....|....|:.::||||.|...|.:......||::|:.|.:|||.||||..:  ..|.|.
pombe   131 SLRYVPILGWFMILSDVVFIDRSRRSDAIQLFAKAARRMRKENISIWVFAEGTRSYSLKPCLLPL 195

  Fly   190 KKGAFHMAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVR 254
            ||||||:|:..|:||:|:...:|....:...|:.|.|..:|..|.|:.|||.|.:|::.|:....
pombe   196 KKGAFHLAVQAQVPIIPIAIQTYGHLFHPPTKVFNKGEALIKVLDPIPTEGKTAEDVNDLLHETE 260

  Fly   255 SQM 257
            :.|
pombe   261 TAM 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 64/185 (35%)
slc1NP_594605.1 PlsC 36..278 CDD:223282 71/230 (31%)
LPLAT_AGPAT-like 85..260 CDD:153251 62/176 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 89 1.000 Domainoid score I2093
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 136 1.000 Inparanoid score I1394
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - otm47376
orthoMCL 1 0.900 - - OOG6_100535
Panther 1 1.100 - - LDO PTHR10434
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2233
SonicParanoid 1 1.000 - - X864
TreeFam 1 0.960 - -
1211.850

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