DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and acl-1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_510606.1 Gene:acl-1 / 181671 WormBaseID:WBGene00010339 Length:262 Species:Caenorhabditis elegans


Alignment Length:268 Identity:94/268 - (35%)
Similarity:132/268 - (49%) Gaps:35/268 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVR------------NLLW 65
            |.||..||       :..:|.: .:|:|:     .::|..||.....:.            .:..
 Worm    13 LLLLAQLP-------VIGFYIR-AVYFGM-----CLIIGGFLGGLASIPFGKSPNNHFRMFKIFQ 64

  Fly    66 ASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFY 130
            |.||      .:|:|:|||..|.|...:..||:|||||:||||||...|.|  .|.|:.|..|.|
 Worm    65 AMTW------PMGVRFELRNSEILHDKKPYIIIANHQSALDVLGMSFAWPV--DCVVMLKSSLKY 121

  Fly   131 AWPFGLAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFH 195
            ...|.|.|:|...::|:|...|||.:|::.....|..::.|:|::|||||.....|.|||||||.
 Worm   122 LPGFNLCAYLCDSVYINRFSKEKALKTVDTTLHEIVTKKRKVWIYPEGTRNAEPELLPFKKGAFI 186

  Fly   196 MAIDQQIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIET 260
            :|...:|||:|.||||:..|.:..:|.|.||..:|..||.|.:...  |.||.|....|..|...
 Worm   187 LAKQAKIPIVPCVFSSHKFFYSHAEKRLTSGNCIIDILPEVDSSKF--DSIDDLSAHCRKIMQAH 249

  Fly   261 FKVTSAEA 268
            .:...|||
 Worm   250 REKLDAEA 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 75/183 (41%)
acl-1NP_510606.1 PlsC 26..>199 CDD:223282 66/186 (35%)
LPLAT_AGPAT-like 65..243 CDD:153251 78/187 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156641
Domainoid 1 1.000 114 1.000 Domainoid score I3803
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1813
OMA 1 1.010 - - QHG28721
OrthoDB 1 1.010 - - D1623097at2759
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - mtm4826
orthoMCL 1 0.900 - - OOG6_100535
Panther 1 1.100 - - O PTHR10434
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X864
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.670

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