DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat1 and acl-5

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001041282.1 Gene:acl-5 / 181241 WormBaseID:WBGene00011106 Length:512 Species:Caenorhabditis elegans


Alignment Length:281 Identity:71/281 - (25%)
Similarity:112/281 - (39%) Gaps:68/281 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 FLLLMLPFLYETNHIFRYY---------FKFLMYYGIVSFNSIILIP-----AFLTRPCDVRNLL 64
            |....|..|:....:||||         |...:...|||.:.|.|:|     .||.|.|   .|:
 Worm   151 FFNWQLTLLWIAGFMFRYYVLVPCRIALFGIAIVLMIVSTSIIGLVPNAKVRKFLNRRC---MLM 212

  Fly    65 WASTWCHRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLD--VLGMFNIWHVMNK-------- 119
            ....:....|::|    ....||:.| ::..|.||||.|.:|  ||...|.:.::.:        
 Worm   213 CMRIYSRAFSSVI----RFHDKENRA-NKGGICVANHTSPIDVMVLSCDNCYAMIGQKQAGFLGF 272

  Fly   120 -CTVVAKRELFYAWPFGLAAWLAGLIFIDRVR-GEKARETLNDVNRRIKKQRIKLWVFPEGTRRN 182
             .|.:::.|....:..|.|.        ||.: .::.||.:||.|      ::.:.:|||||..|
 Worm   273 LQTTLSRSEHHIWFERGEAG--------DRAKVMDRMREHVNDEN------KLPIIIFPEGTCIN 323

  Fly   183 TGALHPFKKGAFHMAIDQQIPILPVVFSSYCTFLND---KKKILNSGRIVITTLP---------- 234
            ..::..||||:|.:.    ..|.|:.. .|.|.|.|   .....:.||.:.:.:.          
 Worm   324 NTSVMMFKKGSFEIG----STIYPIAV-KYDTRLTDAFWNSSAQSYGRYLWSMMTSWAIICDVWY 383

  Fly   235 -PVSTEGLTKDDIDVLMERVR 254
             |..|.|..:|.|. ..:||:
 Worm   384 LPAMTRGENEDSIS-FAKRVK 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 51/209 (24%)
acl-5NP_001041282.1 LPLAT 68..444 CDD:388412 71/281 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.