DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat1 and F44B9.5

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_498746.1 Gene:F44B9.5 / 176127 WormBaseID:WBGene00018408 Length:390 Species:Caenorhabditis elegans


Alignment Length:359 Identity:75/359 - (20%)
Similarity:127/359 - (35%) Gaps:94/359 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LGLFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWASTWCHRVST 75
            :||.:||:..||                    .|::.|:  |.|.|......:......|    :
 Worm    41 VGLIILLIRVFL--------------------GFHTFIV--ACLLRKSAALRMHTLRIMC----S 79

  Fly    76 LIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPF-GLAAW 139
            ::|:..|..|..   .:.|.::.|||.|.||.|.:    .::..|.:.:      .|.. .:..|
 Worm    80 ILGIVVEKSGHR---DESARVLCANHVSILDHLAV----DILTPCLLPS------VWDIPSIIRW 131

  Fly   140 LAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEG-TRRNTGALHPFKKGAFHM-AIDQQI 202
            ..|.:.:...||..  :.::...:.:.::::.|..|||| ......||..|....|.: ::.|.:
 Worm   132 CFGYVDLGATRGRD--QLVSRAKQLLTREQMPLLAFPEGIITSGEKALIKFNTWCFEVSSVVQPV 194

  Fly   203 PI-----------LPVVFSSYCTFLNDKKKILNSGRIVITTLP--PVSTEGLTKDDIDVLMERVR 254
            .:           :.|:.||:.|.|           .....||  .::.|.|.|      |||..
 Worm   195 SVRVWRPYPWKVSVSVLGSSWWTDL-----------FYFFALPFTVITVEYLPK------MERRE 242

  Fly   255 SQMIETFKVTSAEAL--HRYKPIKKVGIPAASSASTSSTTTTTLA---------SPGTAVTPVAD 308
            ::.:|.|....||.|  :....:.|.||..|:.|:....|....|         ||     .:||
 Worm   243 NESLEEFTARVAETLAGNLKIAVSKFGISDATEAAKRLRTDRERAKKVVVREKTSP-----RLAD 302

  Fly   309 AAVAAAAAVASSSSAYGQPPGYEAGAAKASLLKT 342
            .......|:....|.    |.:...|.:..|.||
 Worm   303 PRQMDECAMRIKQSF----PSFHLSAIRRDLEKT 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 41/199 (21%)
F44B9.5NP_498746.1 LPLAT 75..279 CDD:302626 51/239 (21%)
CUE 305..346 CDD:214715 7/32 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0204
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.