DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Agpat1 and Gpat4

DIOPT Version :10

Sequence 1:NP_572828.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_011240406.1 Gene:Gpat4 / 102247 MGIID:2142716 Length:462 Species:Mus musculus


Alignment Length:314 Identity:72/314 - (22%)
Similarity:118/314 - (37%) Gaps:91/314 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LYETNHIFRYY-FKFLMYYGI-VSFNSIILIPAFLTRPCDVRNLLWASTWCHRVSTLIGLRWELR 84
            |..||:.|:|. .:..:.:|: |......|:|..:........||...|      |::|.....|
Mouse   146 LSRTNYNFQYISLRLTILWGLGVLIRYCFLLPLRIALAFTGIGLLVVGT------TMVGYLPNGR 204

  Fly    85 GKEHLAKD------QAC---------------------IIVANHQSSLDVLGMFN------IWHV 116
            .||.|:|.      :.|                     |.||||.|.:||:.:.:      :..|
Mouse   205 FKEFLSKHVHLMCYRICVRALTAIITYHNRKNRPRNGGICVANHTSPIDVIILASDGYYAMVGQV 269

  Fly   117 MNKCTVVAKRELFYAWPFGLAAWLAGLIFIDR-VRGEKARETLNDVNRRIKKQRIKLWVFPEGTR 180
            ......|.:|.:..|.|.   .|.......|| :..::..|.:.|      |.::.:.:|||||.
Mouse   270 HGGLMGVIQRAMVKACPH---VWFERSEVKDRHLVAKRLTEHVQD------KSKLPILIFPEGTC 325

  Fly   181 RNTGALHPFKKGAFHM-AIDQQIPILPVVFSSY-----CTFLNDKK--------KILNSGRIVIT 231
            .|..::..||||:|.: |....:.|.|.:...|     ..|.|..|        :::.|..||.:
Mouse   326 INNTSVMMFKKGSFEIGATVYPVAIKPPLLVQYDPQFGDAFWNSSKYGMVTYLLRMMTSWAIVCS 390

  Fly   232 T--LPPVSTEGLTKDD-------------------IDVLME--RVRSQMIETFK 262
            .  |||::.|   ||:                   :|:|.:  ..|.::.:|||
Mouse   391 VWYLPPMTRE---KDEDAVQFANRVKSAIARQGGLVDLLWDGGLKREKVKDTFK 441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_572828.1 PlsC 65..259 CDD:439974 58/264 (22%)
Gpat4XP_011240406.1 LPLAT_LPCAT1-like 218..433 CDD:153253 49/226 (22%)

Return to query results.
Submit another query.