DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and Lpcat2

DIOPT Version :10

Sequence 1:NP_572828.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001258273.1 Gene:Lpcat2 / 100359680 RGDID:2325051 Length:544 Species:Rattus norvegicus


Alignment Length:325 Identity:59/325 - (18%)
Similarity:102/325 - (31%) Gaps:133/325 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LLGLFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWASTWCHRVS 74
            |:||.|||..||                     :..|.:..|..||.|        .|.|..:::
  Rat    72 LVGLVLLLAWPF---------------------AVISTVCCPKKLTHP--------ISDWRRKIT 107

  Fly    75 T------------LIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRE 127
            .            .:|.|..::||.....:....:||.|.:..|                     
  Rat   108 QPALKFLGRAMFFSMGFRVTVKGKVASPLEAPIFVVAPHSTFFD--------------------- 151

  Fly   128 LFYAWPFGLAAWLAGL------------------------IFIDRVRGEKARETLNDVNRRIKK- 167
                   |:|..:|||                        :.:.||..:..:.|:|::.:|... 
  Rat   152 -------GIACVVAGLPSLVSRNENAQTPLVGRLLRALQPVLVSRVDPDSRKNTINEIKKRAMSG 209

  Fly   168 -QRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQQIPILPVVFS--------------------- 210
             :..::.||||||..|...|..||.|||...    :|:.||:..                     
  Rat   210 GEWPQILVFPEGTCTNRSCLITFKPGAFIPG----VPVQPVLLRYPNKLDTVTWTWQGYTFIQLC 270

  Fly   211 --SYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFKVTSAEALHRYK 273
              ::|....         ::.:..:|..:.....::|..:...|||:.|.|..::...:  |.|:
  Rat   271 VLTFCQLFT---------KVEVEFMPVQAPSEEERNDPVLFASRVRNLMAEALEIPVTD--HTYE 324

  Fly   274  273
              Rat   325  324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_572828.1 PlsC 65..259 CDD:439974 43/254 (17%)
Lpcat2NP_001258273.1 LPLAT_LPCAT1-like 116..327 CDD:153253 44/252 (17%)
HXXXXD motif. /evidence=ECO:0000250|UniProtKB:Q3TFD2 146..151 1/4 (25%)
EGTC motif 220..223 2/2 (100%)
FRQ1 353..458 CDD:444056
EFh 433..486 CDD:238008
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 520..544
Blue background indicates that the domain is not in the aligned region.

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