DRSC/TRiP Functional Genomics Resources

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Protein Alignment Agpat1 and agpat1

DIOPT Version :9

Sequence 1:NP_001259494.1 Gene:Agpat1 / 32230 FlyBaseID:FBgn0030421 Length:343 Species:Drosophila melanogaster
Sequence 2:XP_012823272.2 Gene:agpat1 / 100037898 XenbaseID:XB-GENE-487933 Length:373 Species:Xenopus tropicalis


Alignment Length:262 Identity:103/262 - (39%)
Similarity:159/262 - (60%) Gaps:2/262 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFIELLGLFLLLMLPFLYETNHIFRYYFKFLMYYGIVSFNSIILIPAFLTRPCDVRNLLWASTWC 70
            |..:.|.:..|:..|.|||.:..|:|:.|...|.|.:...:|:.||....|..:|.|:.......
 Frog   104 SVAQWLLVVCLVAFPLLYEWSVSFKYFCKMAFYNGWILTLAILAIPICAVRGRNVENMKVLQFML 168

  Fly    71 HRVSTLIGLRWELRGKEHLAKDQACIIVANHQSSLDVLGMFNIWHVMNKCTVVAKRELFYAWPFG 135
            ..:..|.|::.|:||.|:....:..::|:|||||||:|||..|  :.::|..:|||||.||...|
 Frog   169 LHIKYLYGIKIEVRGWENFNIKEPYVVVSNHQSSLDLLGMMEI--LPSRCVPIAKRELMYAGTAG 231

  Fly   136 LAAWLAGLIFIDRVRGEKARETLNDVNRRIKKQRIKLWVFPEGTRRNTGALHPFKKGAFHMAIDQ 200
            ||.||||:|||:|.:.:.|...:.:....:.|:.:::||||||||.::|:|.|||:||||:|:..
 Frog   232 LACWLAGVIFINRKKTDDAISVMTEAAETMLKEDVRVWVFPEGTRNHSGSLLPFKRGAFHLAVKA 296

  Fly   201 QIPILPVVFSSYCTFLNDKKKILNSGRIVITTLPPVSTEGLTKDDIDVLMERVRSQMIETFKVTS 265
            |:|::|||.|||..|...|::...:|:..:..||.|.|:||:.||:..|.:|||..|:|.|...|
 Frog   297 QVPVIPVVMSSYKDFYCKKERKFTTGKCTVRILPGVHTKGLSSDDVPELADRVRGMMLEAFSQMS 361

  Fly   266 AE 267
            :|
 Frog   362 SE 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Agpat1NP_001259494.1 LPLAT_AGPAT-like 70..254 CDD:153251 78/183 (43%)
agpat1XP_012823272.2 LPLAT_AGPAT-like 173..350 CDD:153251 78/178 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 131 1.000 Domainoid score I5108
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H55973
Inparanoid 1 1.050 200 1.000 Inparanoid score I3660
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1623097at2759
OrthoFinder 1 1.000 - - FOG0001236
OrthoInspector 1 1.000 - - otm49467
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2233
SonicParanoid 1 1.000 - - X864
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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