DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXC6 and Antp

DIOPT Version :9

Sequence 1:NP_004494.1 Gene:HOXC6 / 3223 HGNCID:5128 Length:235 Species:Homo sapiens
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:110 Identity:70/110 - (63%)
Similarity:78/110 - (70%) Gaps:13/110 - (11%)


- Green bases have known domain annotations that are detailed below.


Human   109 GRTAPQDQKASIQ-------IYPWMQRMNSHSGVGYGADRRRGRQIYSRYQTLELEKEFHFNRYL 166
            |:..|..|..:.|       :||||:     |..|...:|:||||.|:|||||||||||||||||
  Fly   263 GQHTPPSQNPNSQSSGMPSPLYPWMR-----SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYL 322

Human   167 TRRRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGGG 211
            |||||||||:||||||||||||||||||||||| |.|....|.||
  Fly   323 TRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE-NKTKGEPGSGG 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXC6NP_004494.1 Antp-type hexapeptide 122..127 3/4 (75%)
Homeobox 145..198 CDD:395001 49/52 (94%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..235 5/12 (42%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 16/47 (34%)
Homeobox 301..354 CDD:395001 49/52 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45659
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2625
SonicParanoid 1 1.000 - - X14
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.940

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