Sequence 1: | NP_001259491.1 | Gene: | Smr / 32225 | FlyBaseID: | FBgn0265523 | Length: | 3607 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006249367.1 | Gene: | Ncor2 / 360801 | RGDID: | 1310293 | Length: | 2569 | Species: | Rattus norvegicus |
Alignment Length: | 3454 | Identity: | 720/3454 - (20%) |
---|---|---|---|
Similarity: | 1073/3454 - (31%) | Gaps: | 1275/3454 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 542 GGQQPYKKQ-RLSEANANNMNHLPPH----PQQ---QHQQQQQQQQQHQAHQQQH-QRSSPAQVQ 597
Fly 598 QQQQQQMNSSRQSHNDMCRQVVTTPMGMQLKVETLPQQQQKQQQHQQQQQQQ--QQQGR------ 654
Fly 655 --SQPVVSSMSTVVSQPVGTVTVTTAGLSASHSGSSGNVAAGLGTGNTGSASTEAYHPQVEAISP 717
Fly 718 TLP--SDSSIEERGRTSAKEDLLMQIQKVDNEIKSAETTMETLRKKEKSLMEEAALAKEQRAAKE 780
Fly 781 LNDNNNDQEPMVELSWRSQMLAEKIYAANRKTAQAQHSMLQNAAADESSPGSVAGRPWLPLYNQP 845
Fly 846 LDVEALAMLIRQHQSQIRAPLLLHIRKLKAERWAHNQGLVEKYTKDQADWQRRCERMEASAKRKA 910
Fly 911 REAKNREFFEKVFTELRKQREDKERF-NRVGSR--------IKSEADLEEIMDGLQEQALEDKKM 966
Fly 967 RSYAVIPPLMHDARQRRCAYHNENGLIEDMVAVHQQRKALNMWTAGEKETFKEKYLQHPKNFGAI 1031
Fly 1032 AASLDRKSPQDCVRYYYLSKKTENYKQLLRKSRQRTRSSRNPAKAQAAQPQCIIDSMTTGVMTRL 1096
Fly 1097 QREQQQKSGGRSSAVAERERAERAAERERVAEKAAADAAK-----------AAESAAEKASAATK 1150
Fly 1151 AVEATAAGEKVAKA-------AAAAAAAAATTATTATTTTSSSTSSSSSSASSASTASS-STASP 1207
Fly 1208 ATLAGIAADKTDAGKTASASDKNAATAGGPTATGTPTAATTPATATAPPEISAGGE---AKSKNA 1269
Fly 1270 EEEAAATAGAATVATAGTP--------ATGASA-----ASAGEATTATG--------ATATAAAK 1313
Fly 1314 GVGKPETATEPAGTAAKGADSRPDANDPLAKTASKAINAEGYNAIGGNSSSSSSNATGASAPVQG 1378
Fly 1379 VTLNGFKPGYQTVVMANVKASTGGDDSGANAGGAAPGSLAATNASIATSGDKIVKTTPSSRAPNS 1443
Fly 1444 TSSTAANESSSGAGVNTYGHT-ATTAGNYLGQKLKA-------AQVEGLGAGNELHSDVSESKRK 1500
Fly 1501 RFELNSGEAGGNATSAMTNSSTSGSMNISNSHGLKANAKDGSMMAKTSMASTSSASVVVTSTPSA 1565
Fly 1566 SSSSLSSASSMLLISAASVMSTAAGATSSSTATTTATASAISLPLLADGSGNSMVNANEILALDG 1630
Fly 1631 KDKLAS---CFVCKAEACPR--TRPLKKGR---------------GQQYGIPDETIPAGARVCNS 1675
Fly 1676 CQCKS----------VRSRYPNCP-----LPTCPNPKDRAQRLRNIPSR-LFELAPEVRDPLMAE 1724
Fly 1725 FQIPPHATRCCSACLMRIRRKLDPQLNLTDGSSGGAGSGSGGDETDVSTSSCDEREPGGSDTASV 1789
Fly 1790 ESPENLQRHKSLTMVKQQQQQQQQQQQQQQQQQQQQQQQLSQPQPPPPAPQQQKGSSGRGGDQGT 1854
Fly 1855 PLIITPTRMSSKSGSGGAQ-----TAGDNERLLPPAAGQAPKKQKTSEEYDSSATETADEE-NEN 1913
Fly 1914 SPANRQSPKVLFHGH-GHG------HGGHANNVAGLQPP---------------VANMGTGGGV- 1955
Fly 1956 -QPGGAA--------GQQVNGPISMRREAVNNVQDCVFSVIERSLKHKGPQPKGGQGQQQGQ--- 2008
Fly 2009 --GQGQGQG-QGQTPGQSQSPSQQQQQQQQQQSANNLERKELTIVREY-RQDPGILKQQQQQQQA 2069
Fly 2070 GGAPPTSAAGSLPHGTSVQKLTTRPAAVAPPPPAHPLTPTSTGCAGSNNGTSDSLATLSVVNSHM 2134
Fly 2135 GMVGIGHPGPMAHASSAGGIGVDKATITPVVKSSSGSSKSGGGSASSHSTATPPETIIYNVPVAH 2199
Fly 2200 PQR--GIP----PPSQHSVHPAHPSHTQHPAHPQHSSHGQHTQLQVPEPEPQTLDLSIKKPPRDG 2258
Fly 2259 HSPHTGAGGSSSSGSGSGGPSSSDRHHGPPPPTMSMKHIVRSGGMYRGDTVTVPSLAAPSSYLYP 2323
Fly 2324 TRSVKTIGGGGVVPGVLPGVPGSALYLQPVPVPVPISISGQGQ----------LPPRAGQPPPAQ 2378
Fly 2379 PPSGRGVAKVPPKL-SPQQAHHLHPSHG-----H----SPSQQQQQQQQQQQQQQQQAAAAQQQL 2433
Fly 2434 LVKSGSITHGTP---ANSAQQQIIVHAPATAAAAPSSLLSPKFDGLVRQTTPEGVGSVGPGGASG 2495
Fly 2496 SGKHGSITQG-TPLHMPPHHLESKRPYE----SYYKSSQRHSPAQQPGGNQQLPPPPQQSSPQAP 2555
Fly 2556 PP---QGYGVGVSSPYARSPFAGVVEQPQVLSTRQIVMHDYITSQQMQGQQQQQQQQQQQQRNMS 2617
Fly 2618 RGSS----------ASG---------------------GGGGGGSDK-----ESPSPRNSVGSAS 2646
Fly 2647 GFAYGG-----------------------DK---------ESAPRGRP--EYSSRAS----PADH 2673
Fly 2674 VNSTPSPHRTPPPQRQGVIQR-----HNTGSK-------PPSP-----------AAPPPSRMHMP 2715
Fly 2716 PYQYAPSGHDALASFVDVAVQQPQLPVPSQKDDKSPGPSTAPGQVPGSGPPLGPSPLPPHAVVGV 2780
Fly 2781 AQPPPPTAHHDQRYRDLTLHHHHHTLVQQQIAQQ--QHYRSLNVAAQV---DMQRQMDQAKRVMR 2840
Fly 2841 HQQHQVQQQQQQQQQQQHNHALERDREMQERMRERDREREREREREQRERERERERERERERERR 2905
Fly 2906 EQDRARRVVAEEREHDSRRMERMFAGNVVTGSGGAGGGGPSPGQFLRASVPETGPPRSIPDRERE 2970
Fly 2971 SYYRQAHGGPAPEDTPGQLSAQSLIDAIIKHEINRSNDATAGPGREFPRPSFVHAPLPPRGSGSG 3035
Fly 3036 GGTGTRSSPANVLHPMYLRDLRQPLDGGAGSMLTAENNGKPSSSGSPSVINIDLDQERISAAAAA 3100
Fly 3101 VAQQQQQQQAPPPSQSSQSRSVHGQLRTPTSQAGGSAPSPQQIHTKSITFGELTDSIITSDYGTN 3165
Fly 3166 PHLRPPYMAYLQETQSILPPDRWKQNRRMQQKAEEAKHHSQQQQQQQHQQQHHAQQQQQQQQQHH 3230
Fly 3231 AQQHHPQMPGTGSGSAPGGAGQGGGSGGPGSGGGGAGRASTPGEDGRNIIRMPQAVSPRKFNHEM 3295
Fly 3296 MLHHVMGTTGAGGEAGQFFLPSRVVLPEQRGTPSGGGGAPGAGGPGSGGGATTIEKYVKTRIAEV 3360
Fly 3361 MRDDIGYGKNRTVEVRTEDEVTADMVAHSHAAVHAAHVAHAAHVAHAAAMELQHRSKEPPPPEIS 3425
Fly 3426 VSRKTPNQYEVVDASGRRSAGSGSVSV-----SVSGANSHHSPYHPPAAAYAPSTYAFPYSALNV 3485
Fly 3486 PGAAG-------------------GL------------------PP-----HQPLQLAHQ--AVA 3506
Fly 3507 PPGAFAKAKAAHALSELGAVGGGVSLVVGGGSGGIAGGPG-GVSVGVGVPGGGG----------- 3559
Fly 3560 ----------PGSGGGGGGGHNSSSSQASAAVAAA-----VAAAA-----------SESKPLLLS 3598
Fly 3599 KYDALSDED 3607 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Smr | NP_001259491.1 | GPS2_interact | 710..798 | CDD:292412 | 26/89 (29%) |
TPH | <725..1006 | CDD:290579 | 102/289 (35%) | ||
SANT | 1009..1048 | CDD:238096 | 21/38 (55%) | ||
Ncor2 | XP_006249367.1 | GPS2_interact | 141..229 | CDD:406267 | 29/97 (30%) |
SbcC | <156..>411 | CDD:223496 | 96/275 (35%) | ||
SANT | 432..475 | CDD:419695 | 24/42 (57%) | ||
RSC8 | <539..>649 | CDD:227584 | 29/127 (23%) | ||
Myb_DNA-binding | 614..657 | CDD:395191 | 10/53 (19%) | ||
PHA03247 | <1775..2032 | CDD:223021 | 55/275 (20%) | ||
PHA03247 | <1917..2321 | CDD:223021 | 117/743 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1878 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 330 | 1.000 | Inparanoid score | I2371 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001675 | |
OrthoInspector | 1 | 1.000 | - | - | oto96756 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR13992 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 7.050 |