DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tis11 and CTH1

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_010435.1 Gene:CTH1 / 851729 SGDID:S000002558 Length:325 Species:Saccharomyces cerevisiae


Alignment Length:274 Identity:73/274 - (26%)
Similarity:109/274 - (39%) Gaps:54/274 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILQKSREQDDSHYFERGDISKYVTMNDH-----------------LGDF------DCNEVRK-EI 45
            :|.::.:.|||...|..:|::...::::                 ||||      |...... .|
Yeast    50 LLNENTDNDDSSSSEGHNINETDILSEYSPRPSPWLPSKPNCYHPLGDFKDLIISDSRPTNTLPI 114

  Fly    46 RMLLAHGANLDQQHQQQPHRHHGGL---------TRTISQPAQLIQQQQQQHQQQQQQQPAVASL 101
            ....|...|:......:..|....|         |...|.|  |..:..|:..|...|...:...
Yeast   115 NNPFAGNNNISTLATTEKKRKKRSLEVEINPTYTTSAFSLP--LTAENLQKLSQVDSQSTGLPYT 177

  Fly   102 VTITENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELR 166
            :.|.:.       .|||..:..||...|.:|.:.||||||..|...|.||||.|||||||.:||:
Yeast   178 LPIQKT-------TKLEPCRRAPLQLPQLVNKTLYKTELCESFTIKGYCKYGNKCQFAHGLNELK 235

  Fly   167 NVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH----------NADEARAQQAAQAAKSSTQSQSQ 221
            ...:...|:|:.|..:..:|:||||.||.|.|          ||::.|::..|.....:  |.:.
Yeast   236 FKKKSNNYRTKPCINWSKLGYCPYGKRCCFKHGDDKDVEIYQNANDGRSKDTALTPLPT--SLAP 298

  Fly   222 SQQSSSQNFSPKSN 235
            |...:..|.|...|
Yeast   299 SNNDNITNLSKPRN 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 17/24 (71%)
zf-CCCH 174..198 CDD:279036 11/23 (48%)
CTH1NP_010435.1 CTH1 1..323 CDD:227395 73/274 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I3017
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000616
OrthoInspector 1 1.000 - - otm46769
orthoMCL 1 0.900 - - OOG6_101179
Panther 1 1.100 - - LDO PTHR12547
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2078
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.800

Return to query results.
Submit another query.