DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tis11 and AT5G44260

DIOPT Version :10

Sequence 1:NP_511141.2 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_199239.1 Gene:AT5G44260 / 834449 AraportID:AT5G44260 Length:381 Species:Arabidopsis thaliana


Alignment Length:395 Identity:82/395 - (20%)
Similarity:132/395 - (33%) Gaps:138/395 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 LDQQHQQQPHRHHGGLTR------------------TISQPAQLIQQQQQQHQQQQQQQPAVASL 101
            :|.:|.:..|     ::|                  ::|.|.:..::|:........:.|.... 
plant     1 MDVEHHKSGH-----ISRPTVDIPPRKLLSSAKSPSSVSSPLRDYKEQKDYCYDSDSEDPYAGD- 59

  Fly   102 VTITENLGNMNLH----RKLERTQSE---PLPPQQPMNTSR--------YKTELCRPFEEAGECK 151
                    :..::    |:..|::|.   ..|...|...:|        |..|:|..|...|:|.
plant    60 --------HFRMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCS 116

  Fly   152 YGEKCQFAHGSHELRNVHRHP-KYKTEYCRTFHSVGFCPYGPR-----CHFVHNADEARAQQAAQ 210
            .|::|.||||..|   ...|| :|:||.|:.         |..     |.|.|:..:.|....  
plant   117 RGDECGFAHGVFE---CWLHPSRYRTEACKD---------GKHCKRKVCFFAHSPRQLRVLPP-- 167

  Fly   211 AAKSSTQSQSQSQQSSSQNFSPKSNQSSNQSSNSSSSSSSSGGGGGGGNS------INNNNGSQF 269
                                ||:::              .|||.||..:|      .|.||....
plant   168 --------------------SPENH--------------ISGGCGGSPSSSPASVLSNKNNRCCL 198

  Fly   270 YLPLSPPLSMSTGSDRESPTGSLSLSPTNSLTSFP----FHDALQHGYLASNGAKSNSSASSTSS 330
            :...||..::...|  .||:.|..|||.:...:|.    ...|:.:..::|..:.|.:.|.:.||
plant   199 FCSHSPTSTLLNLS--RSPSSSPPLSPADKADAFSRLSRRRTAVLNELISSLDSLSLTEALAASS 261

  Fly   331 ASGMGLGMSMGIGQGMIIGQGLGMGHHGPATPP-------------ESP-NVPISPVHTP----- 376
            :|.:.:.:|...   ||....|...||....||             .|| ...:||..||     
plant   262 SSPVTMPISTAT---MIASSNLSSNHHHHRLPPWLDVGDRDLQLQQSSPLRFALSPSSTPSYLHG 323

  Fly   377 ---PP 378
               ||
plant   324 QLQPP 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_511141.2 CTH1 <121..>198 CDD:227395 26/93 (28%)
AT5G44260NP_199239.1 zf-CCCH 104..127 CDD:459885 10/22 (45%)

Return to query results.
Submit another query.