DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and ZFN2

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001318339.1 Gene:ZFN2 / 817855 AraportID:AT2G32930 Length:457 Species:Arabidopsis thaliana


Alignment Length:425 Identity:87/425 - (20%)
Similarity:134/425 - (31%) Gaps:115/425 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 QQHQQQQQQQPAVASLVTITENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGEC 150
            :..||.|....::.|...|.:....|.::.. ...||.|.|       .|.....|:.|...|:|
plant     3 ETQQQVQNSTGSIRSPDKIEDTFRRMKVNED-NMEQSSPYP-------DRPGERDCQFFLRTGQC 59

  Fly   151 KYGEKCQFAHGSHELRNVHRHPKYKTEY---------CRTFHSVGFCPYGPRCHFVHNADEARAQ 206
            .||..|::   :|.|.|:.:...|..:.         |..|...|.|.|||.|.:.|..|...|.
plant    60 GYGNSCRY---NHPLTNLPQGIIYYRDQLPERVGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAG 121

  Fly   207 QAAQAAKSSTQSQSQS-----QQSSSQNFS---------PKSNQSSNQSSNSSSSSSSSGGGGGG 257
            ............|.:.     .|:....|.         |.|..|:..|:.:.||..|.|.....
plant   122 PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHSQPSNGHSAYAMSSFPSVGFPYAS 186

  Fly   258 GNSINN----NNG---------SQFYLP--------LSPPLSMSTGSDRESP----------TGS 291
            |.::.:    ..|         ||.|:|        |.||...:|.....:|          :.|
plant   187 GMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYMTASNPIYNMKTQLDSSSS 251

  Fly   292 LSLSPTNSLTSFPFHDALQHGYLASNG-------------------------------AKSNSSA 325
            .|::.|.:.....|.:..:..:..:.|                               |:....|
plant   252 ASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPA 316

  Fly   326 SSTSSASGM-GLGMSMGIGQGMII----GQGLGMGH---HGPATPPESPNVPISPVHTPP-PYDV 381
            .....|.|. ..|.:......|::    ..||.|..   ..|..||.|.|:.||   :|| |.|:
plant   317 CGNFKAYGFCKFGANCKFDHSMLLNPYNNTGLAMSSLPTPYPYAPPVSTNLRIS---SPPSPSDM 378

  Fly   382 VVSGSGAGNNSVGSKQLLQKSVSTPMQQEDTPRLP 416
            ....:  |..:....|.|:..     :|:|:|..|
plant   379 TTLSN--GKPAAAEAQSLETE-----KQDDSPTEP 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 7/24 (29%)
zf-CCCH 174..198 CDD:279036 9/32 (28%)
ZFN2NP_001318339.1 zf-CCCH 45..70 CDD:395517 7/27 (26%)
zf-CCCH 90..115 CDD:395517 9/24 (38%)
zf-CCCH 134..159 CDD:395517 3/24 (13%)
zf-CCCH 268..292 CDD:395517 1/23 (4%)
zf-CCCH 312..338 CDD:395517 4/25 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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