DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and zfp36l1

DIOPT Version :10

Sequence 1:NP_511141.2 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_001072758.1 Gene:zfp36l1 / 780215 XenbaseID:XB-GENE-966625 Length:345 Species:Xenopus tropicalis


Alignment Length:377 Identity:124/377 - (32%)
Similarity:171/377 - (45%) Gaps:107/377 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 PHRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVASLVTITENLGNMNLHRKLERTQSEP--- 124
            |.||      :::.|.  .:..|.|.....:.:|:.|        :||.. ::..:|:.||.   
 Frog    55 PRRH------SVTLPN--AKFNQNQFLNSLKMEPSTA--------MGNKE-NKFRDRSFSENGER 102

  Fly   125 --LPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGF 187
              ..|...:|:|||||||||||||.|.||||:|||||||.||||::.||||||||.|||||::||
 Frog   103 LLQKPGGQVNSSRYKTELCRPFEENGSCKYGDKCQFAHGIHELRSLTRHPKYKTELCRTFHTIGF 167

  Fly   188 CPYGPRCHFVHNADEARAQQAAQAAKSSTQSQSQSQQSSSQ-NFSPKSNQSSNQSSNSSSSSSSS 251
            |||||||||:|||:|.|.......|:.|..|.|:.::...| :||.....::|...:|.:|    
 Frog   168 CPYGPRCHFIHNAEERRLVSGRDQAQFSLSSSSKMERPRLQHSFSFAGFPTTNGLLDSPTS---- 228

  Fly   252 GGGGGGGNSINNNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDALQHGYLAS 316
                                 ::||..:||.....|||     .|..|...|.|           
 Frog   229 ---------------------ITPPPILSTDDLINSPT-----LPDCSSNPFTF----------- 256

  Fly   317 NGAKSNSSASSTSSASGMGLGMSMGIGQGMIIGQGLGMGHHGPAT-----PPESPNVPISPVHTP 376
               .|...||..:.:.||.|.:|.....|            .|.:     ..|||.:..||   |
 Frog   257 ---SSQELASLFAPSMGMQLPLSNSNAAG------------SPTSFLFRPMSESPQMFDSP---P 303

  Fly   377 PPYDVV------VSGSGAGNNSVGSKQLLQKSVSTPMQQEDTPRLPVFNRLS 422
            .|.|.:      :|.|.:|::|        .::.|      |.|||:|:|||
 Frog   304 SPQDSLSDQEGYLSSSSSGSDS--------PTLDT------TKRLPIFSRLS 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_511141.2 CTH1 <121..>198 CDD:227395 57/81 (70%)
zfp36l1NP_001072758.1 Tis11B_N 1..104 CDD:461350 13/65 (20%)
CTH1 <79..>178 CDD:227395 62/107 (58%)

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