DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and zgc:114130

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_005173441.1 Gene:zgc:114130 / 570332 ZFINID:ZDB-GENE-050913-48 Length:394 Species:Danio rerio


Alignment Length:319 Identity:103/319 - (32%)
Similarity:138/319 - (43%) Gaps:87/319 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 TSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFV 197
            :|||||||||.|.|.|.||||.|||||||..|||:::||||||||.||||||:||||||.|||||
Zfish   138 SSRYKTELCRTFAERGLCKYGGKCQFAHGPEELRDLNRHPKYKTEPCRTFHSIGFCPYGIRCHFV 202

  Fly   198 HNADEARAQQAAQAAKSSTQSQSQSQQSSSQNFSPKSNQSSNQSSNSSSSSSSSGGGGGGGNSIN 262
            |||::.:||...|.:..:.|.....:||.|....|.:.|                          
Zfish   203 HNAEDDQAQSRPQTSNPTVQRPPLLKQSFSFAGFPTNPQ-------------------------- 241

  Fly   263 NNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTNSLTSFPFHDALQHGYLASNGAKSNSSASS 327
                     ||..||         :|:..|.....::.||....|.|.   ||......|:.   
Zfish   242 ---------PLEAPL---------APSSFLRAPSVSTPTSTAISDLLS---LAFPDIDPNTL--- 282

  Fly   328 TSSASGMGLGMSMGIGQGMIIGQGLGMGHHGPATPPESPNVPISPVHTPPPY-DVVVSGSGAGNN 391
                    |..:..:....:.....|..|.|           :||....||. :|.:..|..|..
Zfish   283 --------LDQARELHPQFLPSPDSGYSHSG-----------LSPTQMAPPQPEVCLRQSPTGGA 328

  Fly   392 SVGSKQLLQKSV----------STPMQQEDTP------RLPVFNRLSSGVEA-YQQQSN 433
            |:|::.|...|:          |:.|...::.      |||:|::||...:| |.:.||
Zfish   329 SLGARSLSHTSLSDHEGGSCSSSSSMSGSESSESASGRRLPIFSQLSVPDDALYNEGSN 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 19/24 (79%)
zf-CCCH 174..198 CDD:279036 20/23 (87%)
zgc:114130XP_005173441.1 zf-CCCH 141..167 CDD:279036 20/25 (80%)
zf-CCCH 179..203 CDD:279036 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000616
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101179
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2078
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.800

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