DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and zfp36l2

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_005156327.1 Gene:zfp36l2 / 333941 ZFINID:ZDB-GENE-030131-5873 Length:373 Species:Danio rerio


Alignment Length:356 Identity:126/356 - (35%)
Similarity:163/356 - (45%) Gaps:98/356 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 QQQQQHQQQQQQQPAVASLVTITENLGNMNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEA 147
            ::.||.|:..||:|.                               ..:|::||||||||||||.
Zfish    96 ERSQQLQEMLQQKPG-------------------------------SQINSTRYKTELCRPFEEN 129

  Fly   148 GECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVHNADEARAQQAAQAA 212
            |.||||||||||||.|||||:.||||||||.|||||::|||||||||||:|||||.||......|
Zfish   130 GSCKYGEKCQFAHGYHELRNLSRHPKYKTEPCRTFHTIGFCPYGPRCHFIHNADERRAATNNTQA 194

  Fly   213 KSSTQSQSQSQQSSSQNF-----SPKSNQSSNQSSNSSSSSSSSGGGGGGGNSINNNNGSQFYLP 272
            :.|.:.....::.||..|     .||.:.|.:.|..|||.||.:.       .|:|         
Zfish   195 RLSQELGILGEKESSNPFLRPRERPKLHHSLSFSGFSSSRSSDTA-------LIDN--------- 243

  Fly   273 LSPPLSMSTGSDRESPTGSLSLSPTN-SLTSFPFHDALQHGYLASNGAKSNSSA-SSTSSASGMG 335
               |.|      |..|..:.||:||: .|.:|.|.|.....:||.....:.||: .|....:|. 
Zfish   244 ---PTS------RTPPPPNCSLTPTSPCLNAFTFPDQDLKAFLAPIIPHTQSSSLYSNIQTNGC- 298

  Fly   336 LGMSMGIGQGMIIGQGLGMGHHGPATPP----ESPNV-PI--SPVHTPPPY--DVVVSGSGAGNN 391
                                   |.:||    ..|:: |:  |||...||.  |.:....|..:.
Zfish   299 -----------------------PPSPPFKMSHLPSMYPLSESPVFDSPPSPPDSLSDPEGYLSG 340

  Fly   392 SVGSKQLLQKSVSTPMQQEDTPRLPVFNRLS 422
            |..|...:..|.|..|  :...|||:|:|||
Zfish   341 SCCSSGTISGSESPSM--DANRRLPIFSRLS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 22/24 (92%)
zf-CCCH 174..198 CDD:279036 20/23 (87%)
zfp36l2XP_005156327.1 Tis11B_N 3..99 CDD:282420 0/2 (0%)
zf-CCCH 118..143 CDD:279036 22/24 (92%)
zf-CCCH 156..180 CDD:279036 20/23 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 61 1.000 Domainoid score I10435
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 166 1.000 Inparanoid score I4153
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000616
OrthoInspector 1 1.000 - - otm25344
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2078
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
98.950

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