DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and Y60A9.3

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_510397.1 Gene:Y60A9.3 / 190441 WormBaseID:WBGene00013370 Length:203 Species:Caenorhabditis elegans


Alignment Length:178 Identity:52/178 - (29%)
Similarity:81/178 - (45%) Gaps:47/178 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 GGLTRTISQPAQLIQQQQQQHQ-----QQQQQQPAVASLVTITENLGNMN-------LHRKLERT 120
            |..:.|:|.|:.  ....::|:     ||.:.:|.:||.    ::|.|.:       ||::::|:
 Worm    24 GTASPTLSPPSS--SGSYKKHEFSPFVQQNETKPKLASY----QSLANQDPCTIPDELHQEMKRS 82

  Fly   121 QSEPLPPQQPMNTSRYKTELCRPFEEAGE-CKYGEKCQFAHGSHELR---NVHRHPKYKTEYCRT 181
            :.:    ::...||.|      .|...|: |.|||||:|||..||||   ....|..|||..|..
 Worm    83 KKK----EEAFKTSLY------GFHRRGQKCAYGEKCKFAHSVHELRFPQTKRNHRNYKTVLCNK 137

  Fly   182 FHSVGFCPYGPRCHFVHNADEARAQQAAQAAKSSTQSQSQSQQSSSQN 229
            |.:.|.|.||.||.|:|.               |..|.|.:|.:.::|
 Worm   138 FSTTGHCKYGIRCQFIHR---------------SMDSTSSNQSNETEN 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 11/25 (44%)
zf-CCCH 174..198 CDD:279036 12/23 (52%)
Y60A9.3NP_510397.1 zf-CCCH 89..115 CDD:279036 14/31 (45%)
zf-CCCH 130..154 CDD:279036 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165266
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2657
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.750

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