DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and oma-2

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_505069.1 Gene:oma-2 / 179183 WormBaseID:WBGene00003865 Length:393 Species:Caenorhabditis elegans


Alignment Length:444 Identity:101/444 - (22%)
Similarity:165/444 - (37%) Gaps:126/444 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NEVRKEIRMLLAHGANLD--QQHQQQPHRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVASL 101
            ||.|.|..:..:|...::  .:.||:|..|...|   :|:.|.|:..::|..::           
 Worm    12 NEARTESSVEPSHPDMMETVPEEQQKPISHIDDL---LSETANLMAVKEQLLKE----------- 62

  Fly   102 VTITENLGNMNLHRKLERTQSEPLPPQQ----PMNTSR------YKTELCRPFEEAGECKYGEKC 156
            :...|::.:|.: |.|:....|.:.|.|    |....|      |||.:|:.:.|:..|.:.|.|
 Worm    63 IAENEHIHSMQM-RALQNLPQEAILPLQYHADPRRRHRMQKPESYKTVICQAWLESKTCAFAENC 126

  Fly   157 QFAHGSHELR----NVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH--NADEA--RAQQAAQAAK 213
            :||||..|||    ...::.||:|:.|..:.:.|.||||.||.|:|  |...|  ||.:..:.::
 Worm   127 RFAHGEEELRPSLIEARQNNKYRTKLCDKYTTTGLCPYGKRCLFIHPDNGPNAYIRADKLFEVSQ 191

  Fly   214 SSTQSQSQSQQ-----------SSSQNF----------SPKSNQSSNQSSNSSSSSSSSGGGGGG 257
            ....:..:.|.           :..|.|          .|.:|.....:..|.            
 Worm   192 RHALADLRDQMEHHIMNGGRSTAGPQQFDMFARPCTPDEPAANMPLGPTPVSI------------ 244

  Fly   258 GNSINNNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTN--SLTSF--------PFHDALQHG 312
                   .|.::.||...||......:|  |..|..|.|:.  :|.|.        ||...|   
 Worm   245 -------RGPRYELPSKKPLETEEAGNR--PPSSWPLDPSTFFALDSLNMATRPISPFESML--- 297

  Fly   313 YLASNGAKSNSSASSTSSASGMGLGMSMGIGQGMIIGQGLGMGHHGPATPPESPNVPISPVHTPP 377
                .||..|...|.....|..| |:|             |....|.....:|.:.|::      
 Worm   298 ----IGAAGNMQYSMLGKQSTPG-GVS-------------GYSSSGSTPSQDSDSSPLT------ 338

  Fly   378 PYDVVVSGSGAGN-----NSVGSKQLLQKSVSTPM-QQEDTPRLPVFNRLSSGV 425
                  :.|.|.:     ||..::.:|.||::.|| ..|.|..:|..::|:..:
 Worm   339 ------AASAAADAACQANSESAQSILLKSINNPMIGNETTLPIPGLDQLAMDI 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 10/24 (42%)
zf-CCCH 174..198 CDD:279036 11/23 (48%)
oma-2NP_505069.1 zf-CCCH 10..>172 CDD:325094 50/174 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I3841
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.890

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