DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and Y116A8C.20

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_503020.1 Gene:Y116A8C.20 / 178478 WormBaseID:WBGene00013797 Length:201 Species:Caenorhabditis elegans


Alignment Length:169 Identity:48/169 - (28%)
Similarity:70/169 - (41%) Gaps:25/169 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 SQPAQLIQQQQQQ----HQQQQQQQPAVASLVTITENLGNMNLHRKLERTQSEPLPPQQPMNTSR 135
            |.|...:.:...:    |:.:..|..|.....||.:.|          |.:.:.:..|:    ..
 Worm    38 SSPGSSVYEASTKTEAVHKLESYQLQASRDPCTIPDEL----------REEMKRMKRQE----GA 88

  Fly   136 YKTELCRPFEEAGECKYGEKCQFAHGSHELR---NVHRHPKYKTEYCRTFHSVGFCPYGPRCHFV 197
            :||.||...:....|.|||:|:||||.||||   ....|..|||..|..|.:.|:|.||.||.|:
 Worm    89 FKTALCLSHKRGKTCIYGEQCKFAHGVHELRCQQAKKNHRNYKTVLCDKFTTTGYCKYGIRCQFI 153

  Fly   198 HNA-DEARAQQAAQAAKSSTQSQSQSQQS---SSQNFSP 232
            |.: |.....:....|......||...::   .|.:|.|
 Worm   154 HRSMDATNVTRPIDTADFKLDVQSDLSRAFALDSSSFLP 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 11/24 (46%)
zf-CCCH 174..198 CDD:279036 12/23 (52%)
Y116A8C.20NP_503020.1 zf-CCCH 89..115 CDD:279036 12/25 (48%)
zf-CCCH 130..154 CDD:279036 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165269
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.800

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