DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tis11 and dct-13

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_503017.1 Gene:dct-13 / 178476 WormBaseID:WBGene00013794 Length:205 Species:Caenorhabditis elegans


Alignment Length:194 Identity:58/194 - (29%)
Similarity:83/194 - (42%) Gaps:37/194 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 AHGANLDQQHQQQPHRHHGGLTRTISQPAQLIQQQQQQHQQQQQQQPAVASL--VTITENLGN-- 110
            |..||..|....|      ..|.:..|.:.::|:.:..|:...    |:|:.  .||::.|..  
 Worm    29 AFPANSTQSLSSQ------SSTGSSDQHSVILQENESAHKLSS----AIANCDPCTISDELREEM 83

  Fly   111 MNLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELR---NVHRHP 172
            |.|.:|                ...:||.||...:....|.|||.|:||||.||||   ....|.
 Worm    84 MRLKKK----------------EKAFKTSLCLSHKRGKTCIYGEACKFAHGVHELRCQQTTRNHR 132

  Fly   173 KYKTEYCRTFHSVGFCPYGPRCHFVHNA-DEARAQQAAQAA--KSSTQSQ-SQSQQSSSQNFSP 232
            .|||..|..|.:.|:|.||.||.|:|.: |...|.:..:.|  |.:.||. |::....|.:|.|
 Worm   133 NYKTVLCDKFTTTGYCKYGARCQFIHRSMDTTPAAKPMETADFKPNVQSDLSRAFALDSSSFLP 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 11/24 (46%)
zf-CCCH 174..198 CDD:279036 12/23 (52%)
dct-13NP_503017.1 zf-CCCH 93..119 CDD:279036 12/25 (48%)
zf-CCCH 134..158 CDD:279036 12/23 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165270
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.800

Return to query results.
Submit another query.