DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and ccch-5

DIOPT Version :10

Sequence 1:NP_511141.2 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_502805.1 Gene:ccch-5 / 178412 WormBaseID:WBGene00013319 Length:199 Species:Caenorhabditis elegans


Alignment Length:196 Identity:53/196 - (27%)
Similarity:86/196 - (43%) Gaps:33/196 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 TISQP--AQLIQQQQ--QQHQQQQQQQPAVASLVTITENLGN--MNLHRKLERTQSEPLPPQQPM 131
            |..||  .::..|:.  .|:.|...||....:..||::::..  |.|.|:               
 Worm    16 TSQQPRSPRMFDQENGFSQNFQPFMQQNKTVNPCTISDDVREEMMRLRRR--------------- 65

  Fly   132 NTSRYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHR-----HPKYKTEYCRTFHSVGFCPYG 191
             .:.:||.||:.|:....|.|||:|:|||...||:..|:     :|||||..|..|.:.|.|.||
 Worm    66 -ENAFKTALCKTFQLTKACSYGEQCKFAHSVEELQLKHQNLGINNPKYKTVLCDNFSTTGHCKYG 129

  Fly   192 PRCHFVHNADEARAQQAAQAAKSSTQSQSQSQQSSSQ------NFSPKSNQSSNQSSNSSSSSSS 250
            .:|.|:|...|..:.:..........|......|.::      :|...::.|:.|...||:.|:|
 Worm   130 TKCQFIHRTVEPASLKIQNPLVPRFPSWFAPPSSLAREFLCLNHFEASTSSSTTQKLTSSNLSTS 194

  Fly   251 S 251
            :
 Worm   195 T 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_511141.2 CTH1 <121..>198 CDD:227395 29/81 (36%)
ccch-5NP_502805.1 zf-CCCH 69..95 CDD:459885 13/25 (52%)
zf-CCCH 112..136 CDD:459885 11/23 (48%)

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