DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and mex-5

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_502566.1 Gene:mex-5 / 178296 WormBaseID:WBGene00003230 Length:468 Species:Caenorhabditis elegans


Alignment Length:445 Identity:97/445 - (21%)
Similarity:140/445 - (31%) Gaps:182/445 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 EQDDSHYF--------------ERGDISKYVTMNDHLGDFDCNEVRKEIRMLLAHGANLDQQHQQ 61
            :|...:||              :.|...:|.....:..|.:...|:     :.|:|:...|||..
 Worm    36 DQQMQYYFAAAMPNQPMATYAAQNGSSQQYAPAAPYYQDANGQYVQ-----VPANGSMAPQQHMM 95

  Fly    62 ---QPHRHHGGLTRTISQPAQLIQQQQQQHQQQ-------------------------------- 91
               ||:.:       ::||.|..||..|..|.|                                
 Worm    96 VSGQPYLY-------MAQPQQGAQQVMQSGQPQLIYYQQSMAPQAAPMYFHPMQAAPMLPEQMGV 153

  Fly    92 ---------QQQQP----------AVASLV------------TITENLGNMNL----HRKLER-- 119
                     .||||          ..|.|.            |:..:..|.|:    ||.:|.  
 Worm   154 MPHTQPAIPPQQQPRQVGVEISSTRTAPLTSSTPLPTSLEYETVQRDNRNRNIQFRYHRVMEHDE 218

  Fly   120 -----------------TQSE-------------------PLP---PQQPMNTSRYKTELCRPFE 145
                             |.|.                   |:|   .|||.|   |||.||. ..
 Worm   219 LPIDEISKITLDNHNDDTMSAEKENHFHEHRGEKFGRRGFPIPETDSQQPPN---YKTRLCM-MH 279

  Fly   146 EAG--ECKYGEKCQFAHGSHELRNVH---RHP--KYKTEYCRTF--HSVGFCPYGPRCHFVHNAD 201
            .:|  .|..|.:|:||||..|||...   |:|  ||||:.|:.|  ...||||||.||.|||..|
 Worm   280 ASGIKPCDMGARCKFAHGLKELRATDAPARYPNNKYKTKLCKNFARGGTGFCPYGLRCEFVHPTD 344

  Fly   202 EARAQQAAQAAKSSTQSQSQSQQSSSQNF-----SPKSNQSSNQS-------------SNSSSSS 248
            : ..|......:.|...|...|....:::     .|:..::..::             :.|....
 Worm   345 K-EFQNIPPYQRMSHDDQDYDQDVIPEDYVVARHQPRFMRTGGRATTPTKVMLKHRNVAGSMMCL 408

  Fly   249 SSSGGGGGGGNSINNNNGSQFYLP--------LSPPL-----SMSTGSDRESPTG 290
            |::|.....|...|....::..||        .:||:     |:||....|...|
 Worm   409 SNAGRDLQAGGDYNQPESNEDDLPPHLRRNRRENPPMNKRRTSLSTKWTSEENLG 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 11/26 (42%)
zf-CCCH 174..198 CDD:279036 14/25 (56%)
mex-5NP_502566.1 ZnF_C3H1 270..298 CDD:214632 13/31 (42%)
zf-CCCH 315..342 CDD:279036 15/26 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160165258
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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