DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and mex-6

DIOPT Version :10

Sequence 1:NP_511141.2 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:NP_496043.1 Gene:mex-6 / 174504 WormBaseID:WBGene00003231 Length:467 Species:Caenorhabditis elegans


Alignment Length:296 Identity:76/296 - (25%)
Similarity:111/296 - (37%) Gaps:75/296 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 NLDQQHQQQPHRHHGGLTRTI----------SQPAQLIQQQQQQHQQQQQQQPA--------VAS 100
            |..|..|.:........|||:          |:..:.:|:.:.::.|.:.|.|.        ..|
 Worm   164 NPQQSEQLRKSGAQISTTRTVPLTSSTPLPTSREYETVQRDRNRNSQSRYQCPIEHDDLPIDEIS 228

  Fly   101 LVTI-----------TENLGNMNLHRKL-ERTQSEP-LPPQQPMNTSRYKTELCRPFEEAG--EC 150
            .:||           .||..|.|...|| .|..::| :..|.|.|   :||.||.. ..||  .|
 Worm   229 KITIDNHNDDTMSAEKENRFNKNRVEKLGRRGFAKPEVDSQLPHN---FKTRLCMT-HAAGINPC 289

  Fly   151 KYGEKCQFAHGSHELRNVH---RHP--KYKTEYCRTF--HSVGFCPYGPRCHFVHNADEARAQQA 208
            ..|.:|:||||..|||...   |:|  ||||:.|:.|  ...|.||||.||.|||.:|.......
 Worm   290 ALGARCKFAHGLKELRASDIPTRYPNNKYKTKLCKNFARGGSGVCPYGLRCEFVHPSDTEFQNIP 354

  Fly   209 AQAAKSSTQSQSQSQQSSSQNFSPKSNQSSNQSSN------------------SSSSSSSSGGGG 255
            ....|...:..|..:......:.|:...:|.:::.                  |::......||.
 Worm   355 PYQRKMVEEHDSIPEDYVVARYQPRFMHTSGKATTPTKVTLKQRNVAGSMMCLSNTGRDLEAGGD 419

  Fly   256 GGGNSINNNNGSQFYLPL--------SPPLSMSTGS 283
            .....||.|:     ||.        :||::.|..|
 Worm   420 FNHPEINEND-----LPPHLRRIRRGNPPVTRSRPS 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_511141.2 CTH1 <121..>198 CDD:227395 36/86 (42%)
mex-6NP_496043.1 PAT1 <50..>186 CDD:401645 6/21 (29%)
CTH1 157..>359 CDD:227395 60/198 (30%)
zf-CCCH 318..345 CDD:459885 14/26 (54%)

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