DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tis11 and LOC100334443

DIOPT Version :9

Sequence 1:NP_001259490.1 Gene:Tis11 / 32222 FlyBaseID:FBgn0011837 Length:436 Species:Drosophila melanogaster
Sequence 2:XP_002665468.1 Gene:LOC100334443 / 100334443 -ID:- Length:361 Species:Danio rerio


Alignment Length:448 Identity:126/448 - (28%)
Similarity:171/448 - (38%) Gaps:142/448 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SKYVTMNDHLGDFDCNEVRKEIRMLLAHGANLDQQHQQQP----HRHHGGLTRTISQ-------- 76
            |.::|....|.|..|...|         |.:|....|:|.    .|.|.....|:..        
Zfish     3 SNFLTPFLELDDEFCKSFR---------GIDLTDATQKQRVVGFQRRHSLCPVTLPNSKFNSTDS 58

  Fly    77 ---PAQLIQQQQQQHQQQQQQQPAVASL-VTITENLGNMNLH-RKLE--RTQSEPLPPQQP---- 130
               |...:.|.....::||..:.::..: ..:..::..:..| ..||  .|.:.||||..|    
Zfish    59 SLWPLPALNQSWSLEKKQQLPRSSLNHIPFRVDRSVSMIESHVSGLESPTTTNNPLPPPPPGLNI 123

  Fly   131 -------MNTS-------RYKTELCRPFEEAGECKYGEKCQFAHGSHELRNVHRHPKYKTEYCRT 181
                   ::||       ||||||||.|||:|.||||.|||||||..|||.::||||||||.|||
Zfish   124 SNCSPKLLSTSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELRGLNRHPKYKTEPCRT 188

  Fly   182 FHSVGFCPYGPRCHFVHNADE-------ARAQQAAQAAKSSTQSQSQSQQSSSQNFS-----PKS 234
            ||::||||||.||||:|||:|       ...::..|..:.|......|.|  .||||     |.:
Zfish   189 FHTIGFCPYGARCHFIHNAEEQMGLSENTHIRERPQLLRQSVSFSGFSSQ--KQNFSGFHAVPDA 251

  Fly   235 NQSSNQSSNSSSSSSSSGGGGGGGNSINNNNGSQFYLPLSPPLSMSTGSDRESPTGSLSLSPTNS 299
            ...|..||.|...|:.|.                   .|..||....||.:.|...| .|.|..:
Zfish   252 LAFSRSSSVSPPPSTGSP-------------------DLLSPLFPEPGSLKSSHPFS-DLGPNGN 296

  Fly   300 LTSFPFHDALQHGYLASNGAKSNSSASSTSSASGMGLGMSMGIGQGMIIGQGLGMGHHGPATPPE 364
            ..:....:::|:...|..|.:.::||.|.|...|                               
Zfish   297 FYAISDAESVQNLAYALKGLQRSASADSLSDQDG------------------------------- 330

  Fly   365 SPNVPISPVHTPPPYDVVVSGSGAGNNSVGSKQLLQKSVSTPMQQEDTPRLPVFNRLS 422
                          |....|.||..:.|:..|                 |||:|:|||
Zfish   331 --------------YTSSSSLSGCDSPSLEGK-----------------RLPIFSRLS 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tis11NP_001259490.1 zf-CCCH 136..161 CDD:279036 20/24 (83%)
zf-CCCH 174..198 CDD:279036 19/23 (83%)
LOC100334443XP_002665468.1 zf-CCCH 143..169 CDD:279036 21/25 (84%)
zf-CCCH 181..205 CDD:279036 19/23 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5063
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000616
OrthoInspector 1 1.000 - - otm25344
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12547
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2078
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
76.900

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