Sequence 1: | NP_001162735.1 | Gene: | Tomosyn / 32217 | FlyBaseID: | FBgn0030412 | Length: | 1470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_196176.1 | Gene: | AT5G05570 / 830440 | AraportID: | AT5G05570 | Length: | 1124 | Species: | Arabidopsis thaliana |
Alignment Length: | 1160 | Identity: | 232/1160 - (20%) |
---|---|---|---|
Similarity: | 389/1160 - (33%) | Gaps: | 376/1160 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 46 GFPYSPTSFAFDPVQKLLAIGDKSGYIRILGRPGVDAHAKHEGESECAVLFAQFLVNEGALVTVT 110
Fly 111 ADDTIHLWSIRQKTPRIVQSLKFQRERVTCIHLPVGSKWLYVGTEKGNIHVV------------- 162
Fly 163 -HIDTFALSGYIINWNKAIEVVRTSHP--GAVIALCDNPLD-ANKLLIAFECGLLVLWD------ 217
Fly 218 -------------------LKAKCAELRWQAAEA--VKSLAW-HYEGKYFVSSHTDGSICSWPTK 260
Fly 261 --PQAKPQSQVCPHAKINKDGNAEKCKPI----YKVDLKSSATGETFTIFSG------------G 307
Fly 308 MPSEKGSKS-NCITVMVGKATTVLEMEHAVCD--------------FITLCENPWPCETQEPYAI 357
Fly 358 AVLLQYDLVLIDLLTPGFPCFESPYP-----MDLHESPVTCCTY----LTDCPSDLVPAFYSVGR 413
Fly 414 TTTSKKSCFSEREWPISGGEWSPA-SCSYSEIVITGHQDGSLKFWDSGAGTLQILYKLKTAKMFE 477
Fly 478 KPRSHVAHSHPESDNPLAVHLIFLCSESRRLCVAGAMGQVMLFK---------FRKVESTSE--- 530
Fly 531 --VLVLEIPILYENFDDIYGTSPECDFLTGHQVQKAE------SSDSDKTAECSLKVRNGAQRKP 587
Fly 588 PGFQ-----------SQLVCLTTGPNRRNVQVTSLCISSSYG--------------------LMA 621
Fly 622 YGTEYGLVII-----DIIQKICLLSVACPDLYGAH-------------DPYSRTPKSPKRIENKE 668
Fly 669 -----EQSRSPSSDQLNDTT-----------------SPDS------------------------ 687
Fly 688 -------------------------------PSLEFVPEAGETSAHDGVATATSSRPSSPDPV-- 719
Fly 720 --------VNSARETLLSGSAAAT----------------AAAAASAAVMMAKSPQRDDAAPKEL 760
Fly 761 QDRRKSMSWKTFNLKRQLSKVNMKIGGLNVNTDMESLKNSSIFYTPKEVSP-------------- 811
Fly 812 ----EAATP----PATEEEATPEGKEDESLDDGEMATNAGAAAAASPS----PAVRGKFRSSTTD 864
Fly 865 SPDEGASSSIASGIRRVDFEQPAGVEVERPNNLPLADAPAPLKPARQKFKEKSRD 919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tomosyn | NP_001162735.1 | WD40 | 52..257 | CDD:295369 | 65/249 (26%) |
WD40 | <55..257 | CDD:225201 | 65/246 (26%) | ||
WD40 repeat | 95..133 | CDD:293791 | 11/37 (30%) | ||
WD40 repeat | 138..184 | CDD:293791 | 13/59 (22%) | ||
WD40 repeat | 192..226 | CDD:293791 | 16/59 (27%) | ||
LLGL | 269..375 | CDD:285555 | 26/136 (19%) | ||
R-SNARE_STXBP5_6 | 1403..1463 | CDD:277226 | |||
AT5G05570 | NP_196176.1 | WD40 repeat | 88..114 | CDD:293791 | 8/27 (30%) |
WD40 repeat | 121..181 | CDD:293791 | 16/70 (23%) | ||
WD40 repeat | 188..225 | CDD:293791 | 14/36 (39%) | ||
WD40 repeat | 258..283 | CDD:293791 | 7/24 (29%) | ||
R-SNARE_STXBP5_6 | 1060..1117 | CDD:277226 | 14/66 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1983 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 136 | 1.000 | Inparanoid score | I1822 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000702 | |
OrthoInspector | 1 | 1.000 | - | - | mtm958 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10241 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X453 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.960 |