Sequence 1: | NP_001162735.1 | Gene: | Tomosyn / 32217 | FlyBaseID: | FBgn0030412 | Length: | 1470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001291542.1 | Gene: | Llgl1 / 54265 | RGDID: | 3012 | Length: | 1067 | Species: | Rattus norvegicus |
Alignment Length: | 1547 | Identity: | 324/1547 - (20%) |
---|---|---|---|
Similarity: | 523/1547 - (33%) | Gaps: | 566/1547 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MKKFTFKGVLDGFRQSVQPQATRQEQEIQEQLKADHFTLKKTFRHGFPYSPTSFAFDPVQKLLAI 65
Fly 66 GDKSGYIRILGRPGVDAHAKHEGESECAVLFAQFLVNEGALVTVTADDTIHLWSIRQKT--PRIV 128
Fly 129 QSLKFQ---------------RERVTCIHLPVGSKWLYVGTEKGNIHVVHIDTFA-LSGYIINWN 177
Fly 178 KAIEVVRTSHP-----GAVIALCDNPLDANKLLIAFECGLLVLWDLKAKCAELRWQAAEAVKSLA 237
Fly 238 WHYEGKYFVSSHTDGSICSWPT----KPQAKPQSQVCPHAKINKDGNAEKCKPIYKVDLKSSATG 298
Fly 299 ETFTIFSGGMPSEKGSKSNCITVMVGKATTVLEMEHAVCDFITLCENPWPCETQEPYAIAVLLQY 363
Fly 364 DLVLIDLLTPGFPCFESPYPMDLHESPVTCCTYLTDCPSDLVPAFYSVGRTTTSKKSCFSEREWP 428
Fly 429 ISGGEWSPASCSYSEIVITGHQDGSLKFWDSGAGTLQILYKLKTAKMFEKPRSH----------- 482
Fly 483 ------VAHSHPESDNP-LAVHLIFLCSESRRLCVAGAMGQVMLFKFRKVESTSEVLVLEIPILY 540
Fly 541 ENFDDIYGTSPECDFLTGHQVQKAESSDSDKTAECSLKVRNGAQRKPPGFQSQLVCLTTGPNRRN 605
Fly 606 VQVTSLCISSSYGLMAYGTEYGLVIIDIIQKICLLSVACPDLYGAHDPYSRTPKSPKRIENKEEQ 670
Fly 671 SRSPSSDQLNDTTSPDSPSLEFVPEAGETSAHDGVATATSSRPSSPDPVVNSARETLLSGSAAAT 735
Fly 736 AAAAASAAVMMAKSPQRDDAAPKELQDRRKSMSWKTFNLKRQLSKVNMKIGGLNVNTDMESLKNS 800
Fly 801 SIFYTPKEVSPEAATPPATEEEATPEGKEDESLDDGEMATNAGAAAAASPSPAVRGKFRSSTTDS 865
Fly 866 PDEGASSSIASGIRRVDFEQPAGVEVERPNNLPLADAPAPLKPARQKFKEKSRDQRLLSVPNIKY 930
Fly 931 QPRDSRGGARNLKNDVSPLMGGGGGGGGVVGASSGIGGSVAGGKKIHKLDGTFSRSRSSSMSSID 995
Fly 996 MSSSESVTCLAFIESYAKRNDILTLVPTLWIGTSFGSILTLFITMPER----DVRKSQPVLITIN 1056
Fly 1057 GGPVVRL--KGSITSMSFLDSYGSIIPYTFETWRDEKRDNKDRTPTKSSSRTSPTFTPTTANTLS 1119
Fly 1120 NTSVAGGASAGGGAGGGGGAGGGAASGGAAAGGPAGGGAGAGSAAGAAGGVGSGVTSGGGMSSSS 1184
Fly 1185 ASSSGISGSVSTGLETLTDRQYIVIASEKQTKVFDV------------ANQ-CCINRIQLSEMDF 1236
Fly 1237 AVK---AETITMKDGSCLATYLSNGHLMVHSLPSLKLLLDTDFLPLMELSFQTKCKQGIVDPMLS 1298
Fly 1299 IWGQQIIVHEDTTQISKIFC-FSHKGHGLYMASPTEIQKFTISSE-----FCQF-ILEMMGELYT 1356
Fly 1357 VHEMPEQPKEGFFKGLFGGGAKLLDREELFGEQS--GKPNRSVARHIP-GPNLEQLGQRASTAAS 1418
Fly 1419 EISRAHQLAMER---------GEKLNLLEERAERMANTAQDFSGTAHQLMLK 1461 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Tomosyn | NP_001162735.1 | WD40 | 52..257 | CDD:295369 | 67/227 (30%) |
WD40 | <55..257 | CDD:225201 | 67/224 (30%) | ||
WD40 repeat | 95..133 | CDD:293791 | 12/39 (31%) | ||
WD40 repeat | 138..184 | CDD:293791 | 13/46 (28%) | ||
WD40 repeat | 192..226 | CDD:293791 | 11/33 (33%) | ||
LLGL | 269..375 | CDD:285555 | 34/105 (32%) | ||
R-SNARE_STXBP5_6 | 1403..1463 | CDD:277226 | 10/68 (15%) | ||
Llgl1 | NP_001291542.1 | WD40 repeat | 38..73 | CDD:293791 | 15/36 (42%) |
WD 1 | 38..71 | 14/32 (44%) | |||
WD 2 | 78..119 | 13/40 (33%) | |||
WD40 repeat | 116..174 | CDD:293791 | 16/58 (28%) | ||
WD 3 | 139..175 | 13/36 (36%) | |||
WD40 repeat | 182..234 | CDD:293791 | 14/51 (27%) | ||
WD 4 | 199..233 | 11/33 (33%) | |||
WD40 repeat | 239..282 | CDD:293791 | 14/42 (33%) | ||
WD 5 | 239..271 | 12/31 (39%) | |||
LLGL | 279..378 | CDD:285555 | 34/105 (32%) | ||
WD 6 | 289..331 | 14/41 (34%) | |||
WD 7 | 339..373 | 12/33 (36%) | |||
WD 8 | 395..473 | 27/78 (35%) | |||
WD 9 | 517..592 | 21/98 (21%) | |||
WD 10 | 601..662 | 20/156 (13%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 669..694 | 8/32 (25%) | |||
WD 11 | 722..782 | 17/63 (27%) | |||
WD 12 | 791..843 | 20/156 (13%) | |||
WD 13 | 848..901 | 15/67 (22%) | |||
WD 14 | 915..938 | 8/22 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1983 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000702 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X453 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.810 |