DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tomosyn and stxbp6

DIOPT Version :10

Sequence 1:NP_727628.3 Gene:Tomosyn / 32217 FlyBaseID:FBgn0030412 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001002063.1 Gene:stxbp6 / 415153 ZFINID:ZDB-GENE-040625-31 Length:211 Species:Danio rerio


Alignment Length:217 Identity:56/217 - (25%)
Similarity:92/217 - (42%) Gaps:47/217 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1276 FLP-----LMELSFQTKCKQGIVDPMLSIWGQQIIVHEDTTQISKIFCFSHKGHGLYMASPTEIQ 1335
            |||     |..:..:.:.|:.|  |.|:..||    .|.||.|    |.|...........|:::
Zfish    12 FLPNDERMLAAVQVKRRTKKKI--PFLATGGQ----GEYTTFI----CLSVTNKKPAQVFLTKVK 66

  Fly  1336 KFTISSEF---CQFILEMMGELYTVHEMPEQPKEGFFKGLFGGGAKLLDREELFGEQSGKP---- 1393
            :|..||.|   .|:.:..:.::..|..:.:.|:   |..:|..|:     ::.....:|:.    
Zfish    67 QFEGSSSFIRRSQWNISQLRQVNGVDAIKDCPE---FDLVFDSGS-----DQWTAGSAGEKCVFV 123

  Fly  1394 ---NRSVARHIP--------------GPNLEQLGQRASTAASEISRAHQLAMERGEKLNLLEERA 1441
               :.:..|.||              |.|...|...|.:.:|.:.:|.|...||||:|...||:.
Zfish   124 QILHHTCQRFIPERKVEFVNCPPKLLGGNSSLLHGAADSVSSAVQKASQALNERGERLGRAEEKT 188

  Fly  1442 ERMANTAQDFSGTAHQLMLKYK 1463
            ..|.|:||.|:.|||:|.:|:|
Zfish   189 SDMMNSAQHFADTAHKLAMKHK 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TomosynNP_727628.3 WD40 <41..257 CDD:441893
WD40 repeat 95..133 CDD:293791
WD40 repeat 138..184 CDD:293791
WD40 repeat 192..226 CDD:293791
LLGL 268..376 CDD:462446
R-SNARE_STXBP5_6 1403..1463 CDD:277226 24/59 (41%)
stxbp6NP_001002063.1 PH-STXBP6 2..131 CDD:270200 28/136 (21%)
SNARE 149..211 CDD:473982 25/62 (40%)
Blue background indicates that the domain is not in the aligned region.

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