DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tomosyn and Stxbp6

DIOPT Version :10

Sequence 1:NP_727628.3 Gene:Tomosyn / 32217 FlyBaseID:FBgn0030412 Length:1470 Species:Drosophila melanogaster
Sequence 2:NP_001178801.1 Gene:Stxbp6 / 362734 RGDID:1306117 Length:210 Species:Rattus norvegicus


Alignment Length:218 Identity:60/218 - (27%)
Similarity:89/218 - (40%) Gaps:49/218 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  1272 LDTDFLPLMELSFQTKCKQGIVDPMLSIWGQQIIVHEDTTQISKIFCFSHKGHGLYMASPTEIQK 1336
            ||...|..:::..:||.|    .|.|:..||    .|..|.|    |.|........||.|::::
  Rat    15 LDERMLGAVQVKRRTKKK----IPFLATGGQ----GEYLTYI----CLSVTNKKPTQASITKVKQ 67

  Fly  1337 FTISSEF---CQFILEMMGELYTVHEMPEQPKEGF---FKGLFGGGAK----------------- 1378
            |..|:.|   .|::||.:.::..:.  |.:....|   |:..|.....                 
  Rat    68 FEGSTSFVRRSQWMLEQLRQVNGID--PNRDSAEFDLLFENAFDQWVASTASEKCTFFQILHHTC 130

  Fly  1379 ---LLDREELFGEQSGKPNRSVARHIPGPNLEQLGQRASTAASEISRAHQLAMERGEKLNLLEER 1440
               |.||:..|.....|        |.|.| ..|...|.:..|.:.:|.|...||||:|...||:
  Rat   131 QRYLTDRKPEFINCQSK--------IMGGN-SILHSAADSVTSAVQKASQALNERGERLGRAEEK 186

  Fly  1441 AERMANTAQDFSGTAHQLMLKYK 1463
            .|.|.|:||.|:.|||:|.:|:|
  Rat   187 TEDMKNSAQQFAETAHKLAMKHK 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TomosynNP_727628.3 WD40 <41..257 CDD:441893
WD40 repeat 95..133 CDD:293791
WD40 repeat 138..184 CDD:293791
WD40 repeat 192..226 CDD:293791
LLGL 268..376 CDD:462446
R-SNARE_STXBP5_6 1403..1463 CDD:277226 25/59 (42%)
Stxbp6NP_001178801.1 PH-STXBP6 2..131 CDD:270200 28/129 (22%)
R-SNARE_STXBP6 149..210 CDD:277245 26/62 (42%)
Blue background indicates that the domain is not in the aligned region.

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