DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG2540 and AT4G31290

DIOPT Version :10

Sequence 1:NP_572818.1 Gene:CG2540 / 32216 FlyBaseID:FBgn0030411 Length:311 Species:Drosophila melanogaster
Sequence 2:NP_567871.1 Gene:AT4G31290 / 829256 AraportID:AT4G31290 Length:227 Species:Arabidopsis thaliana


Alignment Length:198 Identity:66/198 - (33%)
Similarity:109/198 - (55%) Gaps:21/198 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VWIFGYGSLVWKTDFPYIDRRRGFVWGFKRRFYQHSIDHRGIPERPGRVVTLLPGDPAQDRV-YG 137
            :|:||||||||...|.|.::..||:.|:||.|....|||||.||.|.|..||   :.|::.: :|
plant     3 MWVFGYGSLVWNPGFHYDEKVLGFIKGYKRVFDLACIDHRGTPEHPARTCTL---EKAEEAICWG 64

  Fly   138 VAY--RIAASQKGAVLDHLDYREKNGYERCSLEFHEYPTDGAEPIQ-----VIMYVATQ---AND 192
            .|:  |....::...:::|:.||.....:.|::|  |..|  :|::     ||::.:|.   :|.
plant    65 TAFCVRGGPEKERLAMEYLERRECEYDLKTSVDF--YKED--DPLKPAVTGVIVFTSTPDKVSNK 125

  Fly   193 SYAGDVWQVPCIARQIFSSAGPSGPNREYLFNLAAAMDQLFPGAVDEHLEELVACVKRYIVEDEP 257
            .|.|.. .:..:||||.::.||.|.||:|||.|..||..:  |..::::.||...|::.:.|...
plant   126 YYLGPA-PLEDMARQIATANGPCGNNRDYLFLLEKAMHDI--GHEEDYVIELANEVRKVLAESST 187

  Fly   258 QLI 260
            :.:
plant   188 KKV 190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG2540NP_572818.1 ChaC 74..251 CDD:398428 65/187 (35%)
AT4G31290NP_567871.1 GGCT_like 3..180 CDD:451440 65/186 (35%)

Return to query results.
Submit another query.