DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and AtHB23

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_564268.1 Gene:AtHB23 / 839587 AraportID:AT1G26960 Length:255 Species:Arabidopsis thaliana


Alignment Length:92 Identity:27/92 - (29%)
Similarity:38/92 - (41%) Gaps:16/92 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 GYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQ 209
            |..|:....||.|.|.||    ....||..||:.|.....|....:.::|..|.|...|:..|:|
plant    57 GDEEYSDDGSKMGEKKRR----LNMEQLKALEKDFELGNKLESDRKLELARALGLQPRQIAIWFQ 117

  Fly   210 NRRTKWKRQNQLRLEQLRHQATMEKDF 236
            |||.:.|.:.            :|||:
plant   118 NRRARSKTKQ------------LEKDY 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 15/52 (29%)
AtHB23NP_564268.1 HOX 71..124 CDD:197696 18/56 (32%)
HALZ 126..168 CDD:396657 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 53 1.000 Domainoid score I4196
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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