DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and AT4G03250

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_192234.2 Gene:AT4G03250 / 827999 AraportID:AT4G03250 Length:507 Species:Arabidopsis thaliana


Alignment Length:108 Identity:28/108 - (25%)
Similarity:43/108 - (39%) Gaps:26/108 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 SGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSET 202
            ||..|:.|        .|:..:..::|...|..|:..||..:...||.:...:..:||.:.|:|.
plant     5 SGEATADG--------DKASTENSKKRKLKTPMQVMALENFYNEHKYPTEEMKGKLAEEVGLTEK 61

  Fly   203 QVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAG 245
            ||..|:.:||.|.||.                  |.:||...|
plant    62 QVSGWFCHRRLKDKRH------------------VKEDGNAIG 86

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 17/52 (33%)
AT4G03250NP_192234.2 homeodomain 21..77 CDD:238039 18/55 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0488
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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