DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG11085 and crx

DIOPT Version :9

Sequence 1:	NP_572815.3	Gene:	CG11085 / 32213	FlyBaseID:	FBgn0030408	Length:	295	Species:	Drosophila melanogaster
Sequence 2:	NP_694419.1	Gene:	crx / 81881	ZFINID:	ZDB-GENE-010403-1	Length:	281	Species:	Danio rerio

Alignment Length:	143	Identity:	45/143 - (31%)
Similarity:	66/143 - (46%)	Gaps:	19/143 - (13%)

- Green bases have known domain annotations that are detailed below.

  Fly   146 YAEHKLQLSKSG--------------RKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAET 196
            ||.:.|.||.||              ||.||.||.||..||..||..|...:|..:..|.:||..
Zfish    10 YAVNGLTLSASGMDLLHTAVGYPATPRKQRRERTTFTRTQLDILEALFTKTRYPDIFMREEVALK 74

  Fly   197 LNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDF----VVQDGGGAGGLGCCPS-GLSS 256
            :||.|::|:.|::|||.|.::|.|....|.:.:...:|..    :..|.|.:..:...|: .:..
Zfish    75 INLPESRVQVWFKNRRAKCRQQQQQTSGQPKPRPPKKKSSPPPDLTSDPGTSSSVVAAPTPTVPP 139

  Fly   257 SFSAAAAAAAAAS 269
            |.||..|..:..|
Zfish   140 SVSAGTAPVSVWS 152

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	22/52 (42%)
crx	NP_694419.1	homeodomain	38..97		24/58 (41%)
		Homeobox	49..94	CDD:278475	18/44 (41%)
		TF_Otx	152..230	CDD:281521	1/1 (100%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910