Protein Alignment CG11085 and Rhox13

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_001395833.1
• Gene: Rhox13 / 691244
• RGDID: 1586264
• Length: 234
• Species: Rattus norvegicus
• Alignment Length: 227
• Identity: 57/227 - (25%)
• Similarity: 86/227 - (37%)
• Gaps: 83/227 - (36%)

  Fly    19 RRQTDSELELSNDDSDI-----DIEDRSTPDSTAAGCQQELLLSHHHRRFTHHDESSVESCLSAT 78
            :::::|:.|.|.||.|.     |.:|.||.|...:..:||
  Rat    74 KQESESDTEESYDDEDDDEDEGDEDDLSTSDQDTSDPEQE------------------------- 113

  Fly    79 RGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGPGSGGGTS 143
                                 .:.|..||||..:|.   ||||....|
  Rat   114 ---------------------EAALFVAAAAPPIAP---AAAAIQIPG----------------- 137

  Fly   144 GGYAEHKLQLSKSGRKPRRRRTA---FTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVK 205
                .|:   |:..|..|.||::   ||..|:..:|..|....|..|..|.::|.|||:.|.:||
  Rat   138 ----PHR---SRRRRHRRHRRSSPYLFTQWQVEEMENLFEETPYPDVLTRGELARTLNVPEVKVK 195

  Fly   206 TWYQNRRTKWKRQNQLRLEQLRHQATMEKDFV 237
            .|:.|||.| :|:|: |...||:..:..:||:
  Rat   196 VWFSNRRAK-QRKNE-RRAMLRNMPSGAEDFI 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	23/58 (40%)
Rhox13	NP_001395833.1	Homeodomain	157..207	CDD:459649	20/50 (40%)