DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and vent

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571775.1 Gene:vent / 64810 ZFINID:ZDB-GENE-010108-2 Length:170 Species:Danio rerio


Alignment Length:128 Identity:50/128 - (39%)
Similarity:68/128 - (53%) Gaps:17/128 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 AAAASGANGDRDANGGSGPGSGGGTSGGYAEHKLQLS--KSGRKPRRRRTAFTHAQLAYLERKFR 180
            :.||.||.....|..|..|.| ...|.||.:.:...|  ::|:. ||.||.||..|::.||:.|.
Zfish    22 STAAPGAPLTAAAGAGKAPAS-PANSCGYTDVESDDSEVEAGQN-RRVRTKFTCDQISGLEKSFS 84

  Fly   181 CQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQ-LR------------LEQLRHQA 230
            ..:||....|..:||.|:|||||||||:||||.|.||:.| :|            :..|:||:
Zfish    85 KHRYLGATQRRKIAEKLHLSETQVKTWFQNRRMKLKREVQDMRAADFLYPAVFPPMTSLQHQS 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 30/55 (55%)
ventNP_571775.1 Homeodomain 65..121 CDD:459649 30/55 (55%)

Return to query results.
Submit another query.