DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Rhox2h

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001093935.1 Gene:Rhox2h / 622301 MGIID:3713490 Length:191 Species:Mus musculus


Alignment Length:170 Identity:45/170 - (26%)
Similarity:69/170 - (40%) Gaps:17/170 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 SSVESCLSATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGAN-GDRDANG 132
            :.|::.:....|.|...|..|.|..|.|...|.|..|...:||..|..:|.....:| .|..|.|
Mouse    22 NGVKTLMVLLAGEGRNEGESGRGLPGSGVSAAEGYRAGELSAGGPAAPVAGLMDNSNQEDLSATG 86

  Fly   133 -----GSGPGSGGGTSGGYAEHKLQLSKSGRK--------PRRR---RTAFTHAQLAYLERKFRC 181
                 .:.|......|.|..|:...:|.....        |:.|   |..|...||..||..|:|
Mouse    87 CAQEKETQPEEPVPDSMGDLENVKPMSGPWSTVNPVRVLVPKFRHLWRHNFNVLQLQELESIFQC 151

  Fly   182 QKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQL 221
            ..|:|..:.:.:|.::.:||..|:.|:..||.|::...:|
Mouse   152 NHYISTTEENRLARSMGVSEATVQEWFLKRREKYRSYKRL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 19/55 (35%)
Rhox2hNP_001093935.1 homeodomain 134..186 CDD:238039 18/51 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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