DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and nkx6.3

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001159612.1 Gene:nkx6.3 / 558978 ZFINID:ZDB-GENE-070810-7 Length:272 Species:Danio rerio


Alignment Length:179 Identity:52/179 - (29%)
Similarity:75/179 - (41%) Gaps:42/179 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 THHDESSVESCLSATRGPGSGTGSGGGGGGGGGG------GV-------ASGLSAAAAAAGVAAG 115
            |.|..|.:.| .|...|||:.....|....||.|      ||       .||||.........||
Zfish    51 TPHGISDILS-RSMVSGPGTPALLSGYPSMGGFGTTVPSPGVYYNRDYTPSGLSTFPKPVVECAG 114

  Fly   116 LLAAAAS----------GANGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHA 170
            :...::|          ||......|.|..|.:.|                  |.:..|..|:..
Zfish   115 MKGKSSSCWVDGGYEWRGARQQCGNNMGHNPENVG------------------KKKHTRPTFSGH 161

  Fly   171 QLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQN 219
            |:..||:.|...|||:..:|:.:|.:|.::|:|||.|:|||||||::::
Zfish   162 QIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKS 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 23/52 (44%)
nkx6.3NP_001159612.1 Homeobox 154..207 CDD:278475 23/52 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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