DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and crx

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001016021.1 Gene:crx / 548775 XenbaseID:XB-GENE-478452 Length:290 Species:Xenopus tropicalis


Alignment Length:174 Identity:50/174 - (28%)
Similarity:80/174 - (45%) Gaps:28/174 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 YAEHKLQLSKSG--------------RKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAET 196
            ||.:.|.|:.:|              ||.||.||.||.|||..||..|...:|..:..|.:||..
 Frog    10 YAVNGLTLAGTGMDLLHSAVGYPTTPRKQRRERTTFTRAQLDILEALFAKTRYPDIFMREEVALK 74

  Fly   197 LNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGA----GGLGCCPSGLSSS 257
            :||.|::|:.|::|||.|.::|.|....|.:.:...:|....::....    |.....|.|.:.:
 Frog    75 INLPESRVQVWFKNRRAKCRQQQQQSTGQAKPRPAKKKTSPARETNSEASTNGQYSPPPPGTAVT 139

  Fly   258 FSAAAAAAAAASNPCNF------LTSAAAAAIFRNVGYVHGCPM 295
            .|:.|:|..:..:|.:.      |::|....:.|:.||    ||
 Frog   140 PSSTASATVSIWSPASISPIPDPLSAATTPCMQRSAGY----PM 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 23/52 (44%)
crxNP_001016021.1 Homeobox 42..94 CDD:395001 23/51 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..144 8/50 (16%)
TF_Otx 154..236 CDD:397546 7/30 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.