DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11085 and vtn

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001184007.1 Gene:vtn / 548363 XenbaseID:XB-GENE-989489 Length:447 Species:Xenopus tropicalis


Alignment Length:84 Identity:21/84 - (25%)
Similarity:28/84 - (33%) Gaps:36/84 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 KSGRKPRRRRTA--------FTHAQLAYL---------------ERKFRCQKYLSVADRSDVAET 196
            ||.|:|.||:..        |:...|..|               ||..|||            .|
 Frog   345 KSRRRPSRRKAVGMRSTWSDFSFDPLDGLFDYDDEQSDPDWLPPERPSRCQ------------PT 397

  Fly   197 LNLSETQVKTWYQ-NRRTK 214
            .|:...:...:|: |.|||
 Frog   398 QNVYFFKNDKYYRVNLRTK 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 16/76 (21%)
vtnNP_001184007.1 SO 22..64 CDD:197571
HX 132..436 CDD:238046 21/84 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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