DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Rhox8

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001020947.1 Gene:Rhox8 / 503423 RGDID:1561047 Length:178 Species:Rattus norvegicus


Alignment Length:114 Identity:37/114 - (32%)
Similarity:57/114 - (50%) Gaps:25/114 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 AAASGANGDRDANGGSG-------------PGSGGGTSGGYAEHKL--QLSKSGRKPRRRRTAFT 168
            ::||.:..||..:||:.             |||   |.|..|..:|  |||       |.|..||
  Rat    71 SSASASVDDRSQDGGTSSNDQDKGQQKEPIPGS---TKGHQASPRLPGQLS-------RNRHRFT 125

  Fly   169 HAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
            ..||..|||.|....|.|.|.|.::|..:.::|::|:.|:::||.|:::
  Rat   126 EFQLQELERIFERNHYPSAAARRELARWIGVTESRVENWFKSRRAKYRK 174

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 20/52 (38%)
Rhox8NP_001020947.1 Homeobox 121..173 CDD:278475 20/51 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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