DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Nobox

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001178942.1 Gene:Nobox / 502759 RGDID:1563929 Length:524 Species:Rattus norvegicus


Alignment Length:61 Identity:19/61 - (31%)
Similarity:35/61 - (57%) Gaps:0/61 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQL 221
            ::.||.:...||..|||.|:...|.....|.::|:.:.::..::..|:||||.||::..:|
  Rat   136 KKTRTLYRSDQLEELERIFQEDHYPDSDKRHEIAQMVGVTPQRIMVWFQNRRAKWRKVEKL 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 18/55 (33%)
NoboxNP_001178942.1 Homeodomain 136..192 CDD:459649 18/55 (33%)

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