DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and hoxa5

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_001011405.1 Gene:hoxa5 / 496880 XenbaseID:XB-GENE-486061 Length:274 Species:Xenopus tropicalis


Alignment Length:263 Identity:62/263 - (23%)
Similarity:94/263 - (35%) Gaps:50/263 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SFLIRDLLGDLINRRQTDSELELSNDDSDIDIEDRSTPD---------------STAAGCQQELL 55
            |:.:....|...|  ..|.:|....|.|.::.:.|.|..               |..........
 Frog     3 SYFVNSFCGRYPN--GPDYQLHNYGDHSSVNEQYRDTTSMHSSRYGYGYNGMDLSVGRSASNHFS 65

  Fly    56 LSHHHRRFTHHDESSVE------------------SCLSATRGPGSGTGSGGGGGGGGGGGVASG 102
            .:...|.:..:..||.|                  .|.:....|.|.:..||...........|.
 Frog    66 ANDRARNYPSNPSSSTEPRYNQPAASAHSPPPDPLPCTAVATSPVSDSHQGGKNSITNSNNTTSN 130

  Fly   103 LSAAAAAAGV---AAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYAE-------HKLQLSK-- 155
            .|.::.....   ..||  .|:|||..|..|:..........:.....:       .||.:|.  
 Frog   131 SSNSSTGTSTHINRDGL--GASSGAEDDAPASSDQASSQNSQSPAPSVQPQIYPWMRKLHISHDN 193

  Fly   156 -SGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQN 219
             .|.:.:|.|||:|..|...||::|...:||:...|.::|..|.|||.|:|.|:||||.|||:.|
 Frog   194 IGGPEGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKKDN 258

  Fly   220 QLR 222
            :|:
 Frog   259 KLK 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 24/52 (46%)
hoxa5NP_001011405.1 Homeobox 203..256 CDD:365835 25/52 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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