DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and Ubx

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:32 Identity:9/32 - (28%)
Similarity:13/32 - (40%) Gaps:11/32 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 VIDYDEFTYMVK-----------NYMTDDDIV 202
            |:|:..||.|..           .|:.|.|:|
  Fly    69 VVDFMHFTAMFPVAVILCGMFWGFYVYDSDLV 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 9/32 (28%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649
Blue background indicates that the domain is not in the aligned region.

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