Protein Alignment CG11085 and cdx4

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_989417.1
• Gene: cdx4 / 395056
• XenbaseID: XB-GENE-482787
• Length: 260
• Species: Xenopus tropicalis
• Alignment Length: 186
• Identity: 47/186 - (25%)
• Similarity: 81/186 - (43%)
• Gaps: 19/186 - (10%)

  Fly    65 HH----DESSVESCLSATRGPGSGT-----GSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAA 120
            ||    ||.. :.|  ...||..|:     .|.|.|........:|.||....|.. ::|..:..
 Frog    46 HHVPPMDEQG-QPC--GVWGPQYGSPREQWNSYGAGPSNTNMAQSSDLSPNQFAYN-SSGYSSPH 106

  Fly   121 ASGA----NGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSG--RKPRRRRTAFTHAQLAYLERKF 179
            .||.    :.|......:.|......|..:....:|.:.:|  |...:.|..:|..|...||::|
 Frog   107 PSGTGILHSVDLSHTAANSPSDLSQNSYEWMGKTVQSTSTGKTRTKEKYRVVYTDHQRLELEKEF 171

  Fly   180 RCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKD 235
            ...:|:::..::::|.:|.|||.|||.|:||||.|.::..:.::.|.....:::.|
 Frog   172 HYSRYITIRRKTELAASLRLSERQVKIWFQNRRAKERKLFKKKMNQFDGICSVQSD 227

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	21/55 (38%)
cdx4	NP_989417.1	Caudal_act	16..147	CDD:461413	22/104 (21%)
		Homeodomain	154..209	CDD:459649	21/54 (39%)