Protein Alignment CG11085 and Gsc

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_001137762.2
• Gene: Gsc / 33240
• FlyBaseID: FBgn0010323
• Length: 473
• Species: Drosophila melanogaster
• Alignment Length: 322
• Identity: 81/322 - (25%)
• Similarity: 107/322 - (33%)
• Gaps: 123/322 - (38%)

  Fly    38 EDRSTPDSTAAGCQQELLLSHHHRR--------FTHHDESSVESCLSATRGPGSGT--------G 86
            :.:|...|:..|.|..:.:....||        ||      ::|.| .:|..|.||        .
  Fly   131 QSQSQTPSSDDGSQSGVTILEEERRGGAAAASLFT------IDSIL-GSRQQGGGTAPSQGSHIS 188

  Fly    87 SGGGGGGGGGGGVASGLS------------------------------------------AAAAA 109
            |.|...|....|::.||.                                          |||||
  Fly   189 SNGNQNGLTSNGISLGLKRSGAESPASPNSNSSSSAAASPIRPQRVPAMLQHPGLHLGHLAAAAA 253

  Fly   110 AG---------------------------VAAGLLAAAASGANGDRDANGGSGPGSGGGTSGGYA 147
            :|                           |||..:.|..|||     |.|.||.|.......|:.
  Fly   254 SGFAASPSDFLVAYPNFYPNYMHAAAVAHVAAAQMQAHVSGA-----AAGLSGHGHHPHHPHGHP 313

  Fly   148 EH---------KLQLSKSGRKP-----RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLN 198
            .|         :..||..|..|     ||.||.||..||..||..|....|..|..|..:|..::
  Fly   314 HHPHLGAHHHGQHHLSHLGHGPPPKRKRRHRTIFTEEQLEQLEATFDKTHYPDVVLREQLALKVD 378

  Fly   199 LSETQVKTWYQNRRTKW---KRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPSGLSSS 257
            |.|.:|:.|::|||.||   ||:.|.||.:|:.:         |.|....|.....||.:||
  Fly   379 LKEERVEVWFKNRRAKWRKQKREEQERLRKLQEE---------QCGSTTNGTTNSSSGTTSS 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	24/58 (41%)
Gsc	NP_001137762.2	Homeodomain	341..397	CDD:459649	24/55 (44%)