DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and HOXD10

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_002139.2 Gene:HOXD10 / 3236 HGNCID:5133 Length:340 Species:Homo sapiens


Alignment Length:72 Identity:29/72 - (40%)
Similarity:47/72 - (65%) Gaps:6/72 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 SKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWK-- 216
            :|||||   :|..:|..|...||::|....||:...|.::::::||::.|||.|:||||.|.|  
Human   263 AKSGRK---KRCPYTKHQTLELEKEFLFNMYLTRERRLEISKSVNLTDRQVKIWFQNRRMKLKKM 324

  Fly   217 -RQNQLR 222
             |:|::|
Human   325 SRENRIR 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 20/52 (38%)
HOXD10NP_002139.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 200..268 3/4 (75%)
Homeobox 269..323 CDD:395001 20/53 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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