DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and HOXD1

DIOPT Version :9

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_078777.1 Gene:HOXD1 / 3231 HGNCID:5132 Length:328 Species:Homo sapiens


Alignment Length:172 Identity:55/172 - (31%)
Similarity:75/172 - (43%) Gaps:32/172 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 PG-SGTGSGGGGG----------GGGGGGVASGL--SAAAAAAGVAAGLLAAAASGANG---DRD 129
            || .|..:..||.          .|||..:.||.  .||....|.....|.|:|.|..|   ...
Human   118 PGVLGRAADDGGSHVHYATSAVFSGGGSFLLSGQVDYAAFGEPGPFPACLKASADGHPGAFQTAS 182

  Fly   130 ANGGSGPGSGGGTSG--------GYAEHKLQLSKSGR-------KPRRR-RTAFTHAQLAYLERK 178
            ...|:.|.|....||        .:.:.|...||.|:       .|... ||.|:..||..||::
Human   183 PAPGTYPKSVSPASGLPAAFSTFEWMKVKRNASKKGKLAEYGAASPSSAIRTNFSTKQLTELEKE 247

  Fly   179 FRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQ 220
            |...|||:.|.|.::|..|:|::||||.|:||||.|.|::.:
Human   248 FHFNKYLTRARRIEIANCLHLNDTQVKIWFQNRRMKQKKRER 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeobox 163..216 CDD:278475 26/53 (49%)
HOXD1NP_078777.1 Antp-type hexapeptide 204..209 0/4 (0%)
Homeobox 233..285 CDD:278475 26/51 (51%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..328
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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