Protein Alignment CG11085 and Lhx6

DIOPT Version :9

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_001101307.2
• Gene: Lhx6 / 311901
• RGDID: 1306174
• Length: 392
• Species: Rattus norvegicus
• Alignment Length: 136
• Identity: 33/136 - (24%)
• Similarity: 47/136 - (34%)
• Gaps: 29/136 - (21%)

  Fly   125 NGDRDANGGSGPGSGGGTSGGYAEHKLQLSKSGRKP-RRRRTAFTHAQLAYLERKFRCQKYLSVA 188
            |..|.|..|:|....|.....        ..|..|| :|.||:||..||..::.:|.........
  Rat   220 NLKRAAENGNGLTLEGAVPSE--------QDSQPKPAKRARTSFTAEQLQVMQAQFAQDNNPDAQ 276

  Fly   189 DRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQDGGGAGGLGCCPSG 253
            ....:|:...||...::.|:||.|.:.|:...      :|.....              |..||.
  Rat   277 TLQKLADMTGLSRRVIQVWFQNCRARHKKHTP------QHPVPPS--------------GAPPSR 321

  Fly   254 LSSSFS 259
            |.||.|
  Rat   322 LPSSLS 327

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeobox	163..216	CDD:278475	14/52 (27%)
Lhx6	NP_001101307.2	LIM1_Lhx6	99..152	CDD:188766
		LIM2_Lhx6	160..214	CDD:188768
		Homeobox	252..305	CDD:395001	14/52 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910