Protein Alignment CG11085 and Nkx6-2

DIOPT Version :10

• Sequence 1: NP_572815.3
• Gene: CG11085 / 32213
• FlyBaseID: FBgn0030408
• Length: 295
• Species: Drosophila melanogaster
• Sequence 2: NP_001101028.1
• Gene: Nkx6-2 / 309095
• RGDID: 1307280
• Length: 277
• Species: Rattus norvegicus
• Alignment Length: 182
• Identity: 60/182 - (32%)
• Similarity: 79/182 - (43%)
• Gaps: 32/182 - (17%)

  Fly    75 LSATRGPGSGTGSGGGGGGGGGGGVASGLSAAAAAAGVAAGLLAAAASGANGDRDANGGSGP--- 136
            |....|.....|...|..|||..|....|:..|::|||..|..||.|.|.........|..|
  Rat    54 LGTPHGISDILGRPVGAAGGGLLGSLPRLNGLASSAGVYFGPAAAVARGYPKPLAELPGRPPIFW 118

  Fly   137 -----GS--------GGGTSGGYAEHKLQLSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVA 188
                 ||        |...:||.      |.|.|:|...|.| |:..|:..||:.|...|||:..
  Rat   119 PGVVQGSPWRDPRLAGSAQAGGV------LDKDGKKKHSRPT-FSGQQIFALEKTFEQTKYLAGP 176

  Fly   189 DRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLRLEQLRHQATMEKDFVVQD 240
            :|:.:|.:|.::|:|||.|:|||||||::         ||.|.|......||
  Rat   177 ERARLAYSLGMTESQVKVWFQNRRTKWRK---------RHAAEMASAKKKQD 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11085	NP_572815.3	Homeodomain	161..217	CDD:459649	25/55 (45%)
Nkx6-2	NP_001101028.1	Homeodomain	147..205	CDD:459649	26/58 (45%)