DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and pdx1

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:NP_571518.2 Gene:pdx1 / 30721 ZFINID:ZDB-GENE-990415-122 Length:246 Species:Danio rerio


Alignment Length:62 Identity:30/62 - (48%)
Similarity:43/62 - (69%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 RRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKRQNQLR 222
            :|.|||:|.|||..||::|...||:|...|.::|.||:|:|..:|.|:||||.|||::...|
Zfish   138 KRTRTAYTRAQLLELEKEFLFNKYISRPRRVELALTLSLTERHIKIWFQNRRMKWKKEEDKR 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 28/55 (51%)
pdx1NP_571518.2 Homeodomain 138..194 CDD:459649 28/55 (51%)

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